RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 TUBGCP6Q96RT7 1819 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 TRBV5-3A0A0A0MS03 114 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 OR4C45A6NMZ5 311 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 OR3A1P47881 315 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 NAAAQ02083 359 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 LYZL2Q7Z4W2 148 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 PDPNQ86YL7 162 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 LRRC75AQ8NAA5 344 aa11.74□□□□□ -0.53
TCOF1-214ENST00000515035 IGHV3-43A0A0B4J1X8 118 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PDE6DO43924 150 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 FAM157CP0CG43 387 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 IGHV3-43DP0DP04 118 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 CD40P25942 277 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 IFITM2Q01629 132 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PRICKLE4Q2TBC4 344 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ALKBH6Q3KRA9 238 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF683Q8IZ20 524 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR4P4Q8NGL7 312 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 RHOVQ96L33 236 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SMDT1Q9H4I9 107 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 TRAV8-7A0A075B6U6 113 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 TRGC2P03986 189 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 WDR74Q6RFH5 385 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR4D11Q8NGI4 311 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 C21orf58P58505 322 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SRSF9Q13242 221 aaKnown RBP eCLIP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF260Q3ZCT1 412 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SLC35E4Q6ICL7 350 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 CBLN3Q6UW01 205 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 EIF4E3Q8N5X7 224 aaKnown RBP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR8B12Q8NGG6 310 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 DTD1Q8TEA8 209 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 CDX2Q99626 313 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ALX4Q9H161 411 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SLC52A3Q9NQ40 469 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 HSPB8Q9UJY1 196 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ABCA3Q99758 1704 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ASXL3Q9C0F0 2248 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 A0A1W2PN81 502 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR5B21A6NL26 309 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 MKRN2OSH3BPM6 223 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 P01737 135 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 HOXA6P31267 233 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 MPLP40238 635 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 CYB561D1Q8N8Q1 229 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR2D3Q8NGH3 330 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR5A2Q8NGI9 324 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR4A4PQ8NGN8 299 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 MS4A3Q96HJ5 214 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SARGQ9BW04 601 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 AP5S1Q9NUS5 200 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 OR6C3Q9NZP0 311 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PLPP3O14495 311 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PRRG2O14669 202 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SPRY3O43610 288 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PPYP01298 95 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 GABRA6Q16445 453 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 PABPC1L2AQ5JQF8 200 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 DCAF12L2Q5VW00 463 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF660Q6AZW8 331 aaPredicted RBP11.73□□□□□ -0.53
TCOF1-214ENST00000515035 GAPTQ8N292 157 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 SSMEM1Q8WWF3 244 aa11.73□□□□□ -0.53
TCOF1-214ENST00000515035 NKX2-6A6NCS4 301 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 H3BVH4 76 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 GNB2P62879 340 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 PAFAH1B2P68402 229 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 EIF3IQ13347 325 aaKnown RBP11.72□□□□□ -0.53
TCOF1-214ENST00000515035 C16orf82Q7Z2V1 217 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 OR2Z1Q8NG97 314 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 SGMS2Q8NHU3 365 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 ABHD14AQ9BUJ0 271 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 NAGKQ9UJ70 344 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 SMPD2O60906 423 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 CTSVO60911 334 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 APCSP02743 223 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 TMIGD3P0DMS9 266 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-214ENST00000515035 COL8A1P27658 744 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 BRS3P32247 399 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 NPEPL1Q8NDH3 523 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 UBR3Q6ZT12 1888 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 CTXND1A0A1B0GTU2 59 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 HELTA6NFD8 242 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 M0QZ24 198 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF205O95201 554 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 ZNF141Q15928 474 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 LINC01555Q8NAE3 123 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 HSPB9Q9BQS6 159 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 UFC1Q9Y3C8 167 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 WIPI1Q5MNZ9 446 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-214ENST00000515035 PRSS41Q7RTY9 318 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 OR8A1Q8NGG7 326 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 MRGPRDQ8TDS7 321 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 SEBOXQ9HB31 216 aaPredicted RBP11.72□□□□□ -0.53
TCOF1-214ENST00000515035 MTCH2Q9Y6C9 303 aa11.72□□□□□ -0.53
TCOF1-214ENST00000515035 PCM1Q15154 2024 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 MFSD2BA6NFX1 497 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 NDUFB3O43676 98 aa11.71□□□□□ -0.53
TCOF1-214ENST00000515035 GCGP01275 180 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms