RNA–Protein interactions for RNA: ENST00000514442.5

TCOF1-213, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,195 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-213ENST00000514442 ZNF891A8MT65 544 aaPredicted RBP11.56□□□□□ -0.56
TCOF1-213ENST00000514442 CELA2AP08217 269 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 GNG10P50151 68 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 FAM219AQ8IW50 185 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 C11orf42Q8N5U0 333 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 TM4SF19Q96DZ7 209 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 SLC26A1Q9H2B4 701 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 NAT8Q9UHE5 227 aa11.56□□□□□ -0.56
TCOF1-213ENST00000514442 A0A1W2PQD3 144 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 LRP5LA4QPB2 252 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 MAGEA5P43359 124 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 SOX8P57073 446 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 HES1Q14469 280 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 C17orf78Q8N4C9 275 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 LIPT2A6NK58 231 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 SERPINE3A8MV23 424 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 FUT6P51993 359 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 GAB4Q2WGN9 574 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 CST7O76096 145 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 SP6Q3SY56 376 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 CNTD2Q9H8S5 307 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 HSF4Q9ULV5 492 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 SPRY3O43610 288 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 OR8U8P0C7N1 319 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 PGA4P0DJD7 388 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 PGA5P0DJD9 388 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 BMP5P22003 454 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF83P51522 516 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 BRICD5Q6PL45 260 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 OR10AC1Q8NH08 325 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 PP6455Q8WZ26 134 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 TBX15Q96SF7 602 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 NDUFAF3Q9BU61 184 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 MYOZ1Q9NP98 299 aaPredicted RBP11.55□□□□□ -0.56
TCOF1-213ENST00000514442 ZNF355PQ9NSJ1 428 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 RPH3ALQ9UNE2 315 aa11.55□□□□□ -0.56
TCOF1-213ENST00000514442 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 HKR1P10072 659 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 AGAP20933 346 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 KISS1Q15726 138 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 OR2C3Q8N628 320 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 SMIM8Q96KF7 97 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 NAGKQ9UJ70 344 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 LCTP09848 1927 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 A0A1W2PNV4 684 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 SFTPCP11686 197 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 CD82P27701 267 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 RNPS1Q15287 305 aaKnown RBP11.54□□□□□ -0.56
TCOF1-213ENST00000514442 ADPRHL1Q8NDY3 354 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 OR52N4Q8NGI2 321 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 OR5C1Q8NGR4 320 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 PLPPR2Q96GM1 343 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 ARHGAP5-AS1Q96IT6 56 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 UCN2Q96RP3 112 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 FUT9Q9Y231 359 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 ONECUT2O95948 504 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 PAX5Q02548 391 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 Q6ZN92 141 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 TCTEX1D1Q8N7M0 179 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 OR2T10Q8NGZ9 312 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 TDRD6O60522 2096 aaKnown RBP11.54□□□□□ -0.56
TCOF1-213ENST00000514442 TRBV5-5A0A0J9YX44 114 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 CA6P23280 308 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 OR3A4PP47883 348 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 H2BFWTQ7Z2G1 175 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 HIPK2Q9H2X6 1198 aa11.54□□□□□ -0.56
TCOF1-213ENST00000514442 CRYABP02511 175 aaKnown RBP11.53□□□□□ -0.56
TCOF1-213ENST00000514442 APOA2P02652 100 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 ACAA2P42765 397 aaKnown RBP11.53□□□□□ -0.56
TCOF1-213ENST00000514442 OR5R1Q8NH85 324 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 ZPLD1Q8TCW7 415 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 OTOFQ9HC10 1997 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 IGHV2-70P01814 119 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 MBPP02686 304 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-213ENST00000514442 FUT5Q11128 374 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 SLC35E3Q7Z769 313 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 C14orf144Q96I85 54 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 KIAA1456Q9P272 454 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 MAP1LC3B2A6NCE7 125 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 DHRS3O75911 302 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 CYB5R3P00387 301 aaPredicted RBP11.53□□□□□ -0.56
TCOF1-213ENST00000514442 CTXN2P0C2S0 81 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 LGALS4P56470 323 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 TNFRSF9Q07011 255 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 BSXQ3C1V8 233 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 PRAMEF5Q5TYX0 476 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 PRAMEF6Q5VXH4 476 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 CYB561D1Q8N8Q1 229 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 MAP1LC3BQ9GZQ8 125 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 ANAPC16Q96DE5 110 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 NAA60Q9H7X0 242 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 ICAM5Q9UMF0 924 aa11.53□□□□□ -0.56
TCOF1-213ENST00000514442 TRAV34A0A0B4J273 112 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 TMEM229AB2RXF0 380 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 GAS1P54826 345 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 LRP11Q86VZ4 500 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 OR2Z1Q8NG97 314 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 APOBEC4Q8WW27 367 aaKnown RBP11.52□□□□□ -0.56
TCOF1-213ENST00000514442 PRSS27Q9BQR3 290 aa11.52□□□□□ -0.56
TCOF1-213ENST00000514442 ACTR3CQ9C0K3 210 aaPredicted RBP11.52□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms