RNA–Protein interactions for RNA: ENST00000514307.5

NUP54-214, Transcript of nucleoporin 54, humanhuman

TSL 4

Gene NUP54, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-214ENST00000514307 IL5P05113 134 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 OR5H8P0DN80 308 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 GLP1RP43220 463 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 COL10A1Q03692 680 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 TATDN3Q17R31 274 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 HFEQ30201 348 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 METTL11BQ5VVY1 283 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 GLCCI1Q86VQ1 547 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 CADM3Q8N126 398 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 ZNF561Q8N587 486 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 ZDHHC22Q8N966 263 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 NEU4Q8WWR8 484 aaPredicted RBP13.44□□□□□ -0.26
NUP54-214ENST00000514307 UPRTQ96BW1 309 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 TRAPPC2LQ9UL33 140 aa13.44□□□□□ -0.26
NUP54-214ENST00000514307 PPIAL4EA0A075B759 164 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 IGHV1-69-2A0A0G2JMI3 117 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 OOEPA6NGQ2 149 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 HMX3A6NHT5 357 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 A6NNC1 897 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 PPIAL4DF5H284 164 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 TMEM178BH3BS89 294 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 LGALS8O00214 317 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 NDUFA2O43678 99 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 PPIAL4FP0DN26 164 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 MECP2P51608 486 aaKnown RBP13.43□□□□□ -0.26
NUP54-214ENST00000514307 SPRNQ5BIV9 151 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 ATPAF1Q5TC12 328 aaPredicted RBP13.43□□□□□ -0.26
NUP54-214ENST00000514307 TEX36Q5VZQ5 186 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 GAPTQ8N292 157 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 ZCCHC24Q8N2G6 241 aaKnown RBP13.43□□□□□ -0.26
NUP54-214ENST00000514307 CD177Q8N6Q3 437 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 OR5T2Q8NGG2 359 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 OR4A4PQ8NGN8 299 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 CHAC2Q8WUX2 184 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 GIMAP1Q8WWP7 306 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 MAFIPQ8WZ33 124 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 CCL17Q92583 94 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 DNTTIP1Q9H147 329 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 NCOR1P1Q9H4R4 102 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 ZNF665Q9H7R5 613 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 MYOZ1Q9NP98 299 aaPredicted RBP13.43□□□□□ -0.26
NUP54-214ENST00000514307 DLL4Q9NR61 685 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 TMEM106BQ9NUM4 274 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 PPIAL4AQ9Y536 164 aa13.43□□□□□ -0.26
NUP54-214ENST00000514307 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 C19orf84I3L1E1 186 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 MGST3O14880 152 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 ARPC1BO15143 372 aaKnown RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 FABP7O15540 132 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 CYB5R3P00387 301 aaPredicted RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 TK1P04183 234 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 GSTT2P0CG29 244 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 EGR1P18146 543 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 GZMHP20718 246 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 RAB25P57735 213 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 SEC61A1P61619 476 aaKnown RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 SURF2Q15527 256 aaPredicted RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 LPCAT3Q6P1A2 487 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 ZNF880Q6PDB4 577 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 C11orf88Q6PI97 169 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 TRAT1Q6PIZ9 186 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 PEG10Q86TG7 708 aaKnown RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 ASCC1Q8N9N2 400 aaKnown RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 ANGPTL6Q8NI99 470 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 MRPL30Q8TCC3 161 aaKnown RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 ZFAND1Q8TCF1 268 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 DYRK2Q92630 601 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 DACT3Q96B18 629 aaPredicted RBP13.42□□□□□ -0.26
NUP54-214ENST00000514307 SDSLQ96GA7 329 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 FAM234AQ9H0X4 552 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 RAB9BQ9NP90 201 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 PCDHB10Q9UN67 800 aa13.42□□□□□ -0.26
NUP54-214ENST00000514307 HELZ2Q9BYK8 2649 aaKnown RBP13.41□□□□□ -0.26
NUP54-214ENST00000514307 IGKV1D-17A0A075B6S4 117 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 TMEM82A0PJX8 343 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 NKX6-3A6NJ46 265 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 SNRPGP15A8MWD9 76 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 C3orf80F5H4A9 247 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 SDCBPO00560 298 aaPredicted RBP13.41□□□□□ -0.26
NUP54-214ENST00000514307 FSTL3O95633 263 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 DIRAS3O95661 229 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 TRAPPC2P0DI81 140 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 TRAPPC2BP0DI82 140 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 TAS2R31P59538 309 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 MRPS11P82912 194 aaKnown RBP13.41□□□□□ -0.26
NUP54-214ENST00000514307 PAX5Q02548 391 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 KRBOX4Q5JUW0 171 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 C6orf183Q5T699 404 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 ZNF554Q86TJ5 538 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 DTX2Q86UW9 622 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 ZNF565Q8N9K5 539 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 DEFB108BQ8NET1 73 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 LURAP1Q96LR2 239 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 SLC23A1Q9UHI7 598 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 FLVCR2Q9UPI3 526 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 ALG5Q9Y673 324 aa13.41□□□□□ -0.26
NUP54-214ENST00000514307 IGHV3OR15-7A0A075B7D8 119 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 IGKV1D-8A0A087WSZ0 117 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
NUP54-214ENST00000514307 K7N7A8 449 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms