RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 TMEM104Q8NE00 496 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 FAM81AQ8TBF8 368 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 SLAMF6Q96DU3 332 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 PGAM5Q96HS1 289 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 PKNOX2Q96KN3 472 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 DHRS1Q96LJ7 313 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 RNF167Q9H6Y7 350 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 KRT84Q9NSB2 600 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 AIG1Q9NVV5 245 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 IER3IP1Q9Y5U9 82 aa5.5□□□□□ -1.53
CLDND1-229ENST00000513988 FUOMA2VDF0 154 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ZNF736B4DX44 427 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 M0QX08 132 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 BMPR1BO00238 502 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 CXCR6O00574 342 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 COPEO14579 308 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 SCTP09683 121 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ALDH3A1P30838 453 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 SLC15A1P46059 708 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 CRIP2P52943 208 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 CRYBA2P53672 197 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ZNF121P58317 390 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ERVK11-1P61568 191 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 GRB2P62993 217 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 TAGLNQ01995 201 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 TMEM267Q0VDI3 215 aaPredicted RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 BNIP1Q12981 228 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 MED22Q15528 200 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ZBED5Q49AG3 693 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ACTBL2Q562R1 376 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 MSANTD1Q6ZTZ1 278 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 NRMQ8IXM6 262 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 TMEM61Q8N0U2 210 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 C15orf53Q8NAA6 179 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 OR8B12Q8NGG6 310 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 SLC26A7Q8TE54 656 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ABHD5Q8WTS1 349 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 LZICQ8WZA0 190 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 POLR2J2Q9GZM3 115 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 POLR2J3Q9H1A7 115 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 NIPAL2Q9H841 368 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 MAP6D1Q9H9H5 199 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 RPRD1BQ9NQG5 326 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 MRPL22Q9NWU5 206 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 DNAJC27Q9NZQ0 273 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 ZNF319Q9P2F9 582 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 PEF1Q9UBV8 284 aaKnown RBP5.49□□□□□ -1.53
CLDND1-229ENST00000513988 RNF150Q9ULK6 438 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 SELENOKQ9Y6D0 94 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 U3KQV3 271 aa5.49□□□□□ -1.53
CLDND1-229ENST00000513988 NBDYA0A0U1RRE5 68 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 ZNF729A6NN14 1252 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-229ENST00000513988 TYROBPO43914 113 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 GAS8-AS1O95177 125 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 NDUFB2O95178 105 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 HAND1O96004 215 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 APOC1P02654 83 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 PLA2G1BP04054 148 aaKnown RBP5.48□□□□□ -1.53
CLDND1-229ENST00000513988 FOLR2P14207 255 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 OR3A1P47881 315 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 RPS6KA3P51812 740 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 NDPQ00604 133 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 LIN54Q6MZP7 749 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 UNQ5815/PRO19632Q6UWF5 114 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 PRSS45Q7RTY3 260 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 MZB1Q8WU39 189 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 EMG1Q92979 244 aaKnown RBP5.48□□□□□ -1.53
CLDND1-229ENST00000513988 ANKRD60Q9BZ19 345 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 NRIP3Q9NQ35 241 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 ZDHHC18Q9NUE0 388 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 PSMC3IPQ9P2W1 217 aaPredicted RBP5.48□□□□□ -1.53
CLDND1-229ENST00000513988 FAT3Q8TDW7 4589 aa5.48□□□□□ -1.53
CLDND1-229ENST00000513988 KBTBD11-OT1A0A1B0GTJ5 212 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 A0A1W2PPE3 182 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 ODAMA1E959 279 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 MPTX1A8MV57 137 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 TRBV12-3P01733 135 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 PPIBP23284 216 aaKnown RBP5.47□□□□□ -1.53
CLDND1-229ENST00000513988 PRKCDQ05655 676 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 AESQ08117 197 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 LTC4SQ16873 150 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 C17orf58Q2M2W7 97 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 KRTAP19-4Q3LI73 84 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 LCN1P1Q5VSP4 162 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 ZNF57Q68EA5 555 aaPredicted RBP5.47□□□□□ -1.53
CLDND1-229ENST00000513988 CD200R1LQ6Q8B3 271 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 KIRREL3Q8IZU9 778 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 RNF148Q8N7C7 305 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 RTN4IP1Q8WWV3 396 aaPredicted RBP5.47□□□□□ -1.53
CLDND1-229ENST00000513988 GTF2H4Q92759 462 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 NMNAT3Q96T66 252 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 CHRDL1Q9BU40 450 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 SCRT1Q9BWW7 348 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 KRTAP4-2Q9BYR5 136 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 THAP1Q9NVV9 213 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 UBQLN2Q9UHD9 624 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 SH3GLB1Q9Y371 365 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 NUBP2Q9Y5Y2 271 aa5.47□□□□□ -1.53
CLDND1-229ENST00000513988 TVP23AA6NH52 213 aa5.46□□□□□ -1.54
CLDND1-229ENST00000513988 C2orf70A6NJV1 201 aa5.46□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms