RNA–Protein interactions for RNA: ENST00000513818.1

TOPBP1-209, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 1 (best)

Gene TOPBP1, Length 898 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-209ENST00000513818 SIGIRRQ6IA17 410 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 BTNL3Q6UXE8 466 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 GDPGP1Q6ZNW5 385 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 GDPD3Q7L5L3 318 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 ANKRD13BQ86YJ7 626 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 SUMF2Q8NBJ7 301 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 OR5H6Q8NGV6 325 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 NEK7Q8TDX7 302 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 PCGF1Q9BSM1 259 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 CST11Q9H112 138 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 LPAR5Q9H1C0 372 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 C7orf69Q9H7B7 122 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 RHOFQ9HBH0 211 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 OPN4Q9UHM6 478 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 MTORP42345 2549 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 WNK2Q9Y3S1 2297 aa8.08□□□□□ -1.12
TOPBP1-209ENST00000513818 FN1P02751 2386 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 TRAV40A0A0B4J280 105 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 MGST3O14880 152 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 LDLRAD4O15165 306 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 SOCS1O15524 211 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 RPS19P39019 145 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 GLIPR1P48060 266 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 P2RX3P56373 397 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 RPL31P62899 125 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 KLRD1Q13241 179 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 GPR176Q14439 515 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 SPCS2Q15005 226 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 MPV17LQ2QL34 196 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 MOGAT2Q3SYC2 334 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 KRBOX4Q5JUW0 171 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 CD276Q5ZPR3 534 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 RAB12Q6IQ22 244 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 TPRA1Q86W33 373 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 PDZD9Q8IXQ8 264 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 LY6G5BQ8NDX9 201 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 MRI1Q9BV20 369 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 DPCDQ9BVM2 203 aaPredicted RBP8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM234AQ9H0X4 552 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 IFT22Q9H7X7 185 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 SIRT7Q9NRC8 400 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 RCC2Q9P258 522 aaKnown RBP8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 GHRLQ9UBU3 117 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 AUP1Q9Y679 476 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 DSCAML1Q8TD84 2053 aa8.07□□□□□ -1.12
TOPBP1-209ENST00000513818 KIR2DS1A0A191URI9 304 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 A0A1W2PRD5 423 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 A0A1W2PRF3 423 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 A0A1W2PRM7 423 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 UBE2QL1A1L167 161 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 ECDO95905 644 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 LIPFP07098 398 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 IGHV4-38-2P0DP08 117 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 CPT2P23786 658 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 LMO1P25800 156 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 CFPP27918 469 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 CHATP28329 748 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 GLP1RP43220 463 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 VEGFCP49767 419 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 PSMD7P51665 324 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 PAX8Q06710 450 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 RUSC1-AS1Q66K80 236 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 TMEM200BQ69YZ2 307 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 ZNF782Q6ZMW2 699 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 OR2W3Q7Z3T1 314 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 C6orf201Q7Z4U5 140 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 VMO1Q7Z5L0 202 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 TRAPPC6BQ86SZ2 158 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 LINC00596Q86U02 117 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 Q8N7P7 452 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 CHST4Q8NCG5 386 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 KCNG3Q8TAE7 436 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 C8orf46Q8TAG6 207 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 PPP1R35Q8TAP8 253 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 UBALD1Q8TB05 177 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 TBX15Q96SF7 602 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 SULT4A1Q9BR01 284 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 TM2D1Q9BX74 207 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 BARHL1Q9BZE3 327 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 SIRPDQ9H106 197 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 DCSTAMPQ9H295 470 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 PCDHB16Q9NRJ7 776 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 KIF25Q9UIL4 384 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 PEX16Q9Y5Y5 336 aa8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 SOX21Q9Y651 276 aaPredicted RBP8.06□□□□□ -1.12
TOPBP1-209ENST00000513818 HIVEP2P31629 2446 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 CUBNO60494 3623 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 A0A075B6Q4 140 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 MEIKINA0A087WXM9 373 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 ODAMA1E959 279 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 FAM172BPA6NC97 362 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 CCDC160A6NGH7 325 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 PDCD6O75340 191 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 TOX4O94842 621 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 IL1AP01583 271 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 MMP9P14780 707 aa8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 BLVRBP30043 206 aaPredicted RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 SRP14P37108 136 aaKnown RBP8.05□□□□□ -1.12
TOPBP1-209ENST00000513818 SUMO1P63165 101 aaKnown RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms