RNA–Protein interactions for RNA: ENST00000512590.6

VCAN-208, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 5,923 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-208ENST00000512590 TRAPPC1Q9Y5R8 145 aa7.88□□□□□ -1.15
VCAN-208ENST00000512590 MRPS18BQ9Y676 258 aaKnown RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 COL3A1P02461 1466 aaPredicted RBP7.88□□□□□ -1.15
VCAN-208ENST00000512590 A0A1W2PPQ1 181 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CORTO00230 105 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 TAAR5O14804 337 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 RPL27AP46776 148 aaKnown RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 PSG6Q00889 435 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 MLLT11Q13015 90 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 K7N7A8 449 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 RBFOX2O43251 390 aaKnown RBP eCLIP7.87□□□□□ -1.15
VCAN-208ENST00000512590 LIMK1P53667 647 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 TEX30Q5JUR7 227 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 ZBTB44Q8NCP5 570 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 ZNF354AO60765 605 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 WNT1P04628 370 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 KLK2P20151 261 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CMC4P56277 68 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 RAC3P60763 192 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 EGR3Q06889 387 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 PRSS36Q5K4E3 855 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 OR8A1Q8NGG7 326 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 MRPL30Q8TCC3 161 aaKnown RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 NEU4Q8WWR8 484 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 PP6455Q8WZ26 134 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 SLC25A21Q9BQT8 299 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 TTTY12Q9BZ98 90 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 TGIF2Q9GZN2 237 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CXorf36Q9H7Y0 433 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CSAG2Q9Y5P2 127 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CEACAM1P13688 526 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 SUCLG1P53597 346 aaKnown RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 PLEKHB1Q9UF11 243 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 TRBV7-9A0A0J9YWB2 115 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 TMEM210A6NLX4 147 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 CNTFRP26992 372 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 EMDP50402 254 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 PNLIPRP3Q17RR3 467 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 SLC35E3Q7Z769 313 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 MRAPQ8TCY5 172 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 SMIM14Q96QK8 99 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 PLA2G2FQ9BZM2 168 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 DUSP15Q9H1R2 295 aaPredicted RBP7.87□□□□□ -1.15
VCAN-208ENST00000512590 ELOVL5Q9NYP7 299 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 IL36RNQ9UBH0 155 aa7.87□□□□□ -1.15
VCAN-208ENST00000512590 ROBO1Q9Y6N7 1651 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 ABCC6O95255 1503 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 IGHV1-69-2A0A0G2JMI3 117 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 B9A039 149 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 GASTP01350 101 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 DPTQ07507 201 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 TMEM88Q6PEY1 159 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 NFAM1Q8NET5 270 aaPredicted RBP7.86□□□□□ -1.15
VCAN-208ENST00000512590 CNOT2Q9NZN8 540 aaKnown RBP7.86□□□□□ -1.15
VCAN-208ENST00000512590 GPR45Q9Y5Y3 372 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 LOC389332A0A1B0GUA5 103 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 PDE6DO43924 150 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 JTBO76095 146 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 FAM110DQ8TAY7 271 aaPredicted RBP7.86□□□□□ -1.15
VCAN-208ENST00000512590 FAM131CQ96AQ9 280 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 IL17BQ9UHF5 180 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 CA5AP35218 305 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 KIAA1644Q3SXP7 199 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 LDLRAD2Q5SZI1 272 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 TMEM42Q69YG0 159 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 UNQ6494/PRO21346Q6UXR6 183 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 SDF2Q99470 211 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 TBX21Q9UL17 535 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 A0A087WUJ7 227 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 PRR33A8MZF0 331 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 KLF4O43474 513 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 IGHV4-34P06331 123 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 GATA4P43694 442 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 HCCSP53701 268 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 WNT3P56703 355 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 KHDC3LQ587J8 217 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 PAPPA-AS1Q5QFB9 102 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 PHYHIPQ92561 330 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 FCRL1Q96LA6 429 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 IL21Q9HBE4 155 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 GP6Q9HCN6 339 aa7.86□□□□□ -1.15
VCAN-208ENST00000512590 A0A1W2PPE3 182 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 C17orf51A8MQB3 221 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 CDIPTO14735 213 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 ZNF528Q3MIS6 628 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 GGTA1PQ4G0N0 100 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 BMPERQ8N8U9 685 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 ZNF485Q8NCK3 441 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 C14orf79Q96F83 325 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 C12orf57Q99622 126 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 SSBP3Q9BWW4 388 aaPredicted RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 A0A087WX48 190 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 A0A0A6YYJ9 748 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 IGHV5-51A0A0C4DH38 117 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 UMAD1C9J7I0 102 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 MRPS14O60783 128 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 PSMB1P20618 241 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 RPUSD3Q6P087 351 aaKnown RBP7.85□□□□□ -1.15
VCAN-208ENST00000512590 SLC23A3Q6PIS1 610 aa7.85□□□□□ -1.15
VCAN-208ENST00000512590 CBLL1Q75N03 491 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms