RNA–Protein interactions for RNA: ENST00000512027.1

DDX41-213, Transcript of DEAD-box helicase 41, humanhuman

TSL 4

Gene DDX41, Length 583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-213ENST00000512027 MUL1Q969V5 352 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 DERL3Q96Q80 235 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 METTL9Q9H1A3 318 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 KIF25Q9UIL4 384 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 ERGIC3Q9Y282 383 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 TBL2Q9Y4P3 447 aaKnown RBP13.33□□□□□ -0.28
DDX41-213ENST00000512027 HILPDAQ9Y5L2 63 aa13.33□□□□□ -0.28
DDX41-213ENST00000512027 TRAV39A0A0B4J263 110 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 GPX5O75715 221 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 GLP1RP43220 463 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 PROK1P58294 105 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 C17orf58Q2M2W7 97 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 SLC22A6Q4U2R8 563 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 SLC35E4Q6ICL7 350 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 BRICD5Q6PL45 260 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 OSR2Q8N2R0 312 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 JAGN1Q8N5M9 183 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 Q8NFD4 153 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 OR13A1Q8NGR1 328 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 NDNFQ8TB73 568 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 CORO2AQ92828 525 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 CYYR1Q96J86 154 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 CLEC7AQ9BXN2 247 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 GAL3ST2Q9H3Q3 398 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 ZNF286AQ9HBT8 521 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 CKLFQ9UBR5 152 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 ST3GAL6Q9Y274 331 aa13.32□□□□□ -0.28
DDX41-213ENST00000512027 LSM2Q9Y333 95 aaKnown RBP13.32□□□□□ -0.28
DDX41-213ENST00000512027 MEGF8Q7Z7M0 2845 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 MEIKINA0A087WXM9 373 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 FUOMA2VDF0 154 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 GEMIN2O14893 280 aaKnown RBP13.31□□□□□ -0.28
DDX41-213ENST00000512027 MYF6P23409 242 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 RBM11P57052 281 aaKnown RBP13.31□□□□□ -0.28
DDX41-213ENST00000512027 FAM27D1Q5T7N8 215 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 RSBN1Q5VWQ0 802 aaPredicted RBP13.31□□□□□ -0.28
DDX41-213ENST00000512027 HIST2H2BDQ6DRA6 164 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 CCBE1Q6UXH8 406 aaPredicted RBP13.31□□□□□ -0.28
DDX41-213ENST00000512027 IZUMO2Q6UXV1 221 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 HEPN1Q6WQI6 88 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 TMEM219Q86XT9 240 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 SUMF2Q8NBJ7 301 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 OR4P4Q8NGL7 312 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 S100A13Q99584 98 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 MND1Q9BWT6 205 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 C16orf95Q9H693 158 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 TAS2R3Q9NYW6 316 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 IL36GQ9NZH8 169 aa13.31□□□□□ -0.28
DDX41-213ENST00000512027 MRPS28Q9Y2Q9 187 aaKnown RBP13.31□□□□□ -0.28
DDX41-213ENST00000512027 TSPAN9O75954 239 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 OR7C1O76099 320 aaPredicted RBP13.3□□□□□ -0.28
DDX41-213ENST00000512027 IGHV3-7P01780 117 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 CSTBP04080 98 aaKnown RBP13.3□□□□□ -0.28
DDX41-213ENST00000512027 GP2P55259 537 aaKnown RBP13.3□□□□□ -0.28
DDX41-213ENST00000512027 SLC35A2P78381 396 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 AANATQ16613 207 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 ABHD12Q8N2K0 398 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 OR4D6Q8NGJ1 314 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 MRGPRDQ8TDS7 321 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 MYDGFQ969H8 173 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 FOXRED1Q96CU9 486 aaPredicted RBP13.3□□□□□ -0.28
DDX41-213ENST00000512027 MALSU1Q96EH3 234 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 CITED1Q99966 193 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 TMED9Q9BVK6 235 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 DPCDQ9BVM2 203 aaPredicted RBP13.3□□□□□ -0.28
DDX41-213ENST00000512027 CDCA4Q9BXL8 241 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 ANKRD60Q9BZ19 345 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 SCN3BQ9NY72 215 aa13.3□□□□□ -0.28
DDX41-213ENST00000512027 ZNF729A6NN14 1252 aaPredicted RBP13.29□□□□□ -0.28
DDX41-213ENST00000512027 VGLL3A8MV65 326 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 CD1AP06126 327 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 CGB3P0DN86 165 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 CGB7P0DN87 165 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 NFYBP25208 207 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 BDH1Q02338 343 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 IRF3Q14653 427 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 MED22Q15528 200 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 LTC4SQ16873 150 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 FBLN7Q53RD9 439 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 NHLRC3Q5JS37 347 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 PRR31Q5SQ13 230 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 ATAD3CQ5T2N8 411 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 RNLSQ5VYX0 342 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 GLIPR1L1Q6UWM5 242 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 LEAP2Q969E1 77 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 ABCB10Q9NRK6 738 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 CALYQ9NYX4 217 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 FOXJ3Q9UPW0 622 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 TCF19Q9Y242 345 aa13.29□□□□□ -0.28
DDX41-213ENST00000512027 H0YHG0 523 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 CD24P25063 80 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 GABRA5P31644 462 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 SSTR5P35346 364 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 VHLP40337 213 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 HABP2Q14520 560 aaPredicted RBP13.28□□□□□ -0.28
DDX41-213ENST00000512027 SPHARQ15513 63 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 ACSM3Q53FZ2 586 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 MINOS1Q5TGZ0 78 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 AWAT2Q6E213 333 aa13.28□□□□□ -0.28
DDX41-213ENST00000512027 LYPD6Q86Y78 171 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms