RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 ELK4P28324 431 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 FGF9P31371 208 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 GLRXP35754 106 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 FDFT1P37268 417 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 DAP3P51398 398 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 INSL3P51460 131 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PRKXP51817 358 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 HADHBP55084 474 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PSPHP78330 225 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 REEP5Q00765 189 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CUL1Q13616 776 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 LY6EQ16553 131 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 KLHL38Q2WGJ6 581 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 LELP1Q5T871 98 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PLCXD3Q63HM9 321 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CCDC137Q6PK04 289 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CASP12Q6UXS9 341 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 SGPP2Q8IWX5 399 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 SLC35F2Q8IXU6 374 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 OFCC1Q8IZS5 231 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF615Q8N8J6 731 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 TTLQ8NG68 377 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 OR7G2Q8NG99 324 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 OR52E4Q8NGH9 312 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 GLYATL2Q8WU03 294 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 TMBIM1Q969X1 311 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 MARC2Q969Z3 335 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CIDECQ96AQ7 238 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 LRRC45Q96CN5 670 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 P2RX4Q99571 388 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 NABP2Q9BQ15 211 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 AIF1LQ9BQI0 150 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 C20orf24Q9BUV8 137 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 RGCCQ9H4X1 137 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 RPF2Q9H7B2 306 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 CXorf21Q9HAI6 301 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 RETNQ9HD89 108 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 MYEF2Q9P2K5 600 aaKnown RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 PSMC3IPQ9P2W1 217 aaPredicted RBP2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 TIMM10BQ9Y5J6 103 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 LRP1BQ9NZR2 4599 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 VPS13BQ7Z7G8 4022 aa2.37□□□□□ -2.03
TOPBP1-208ENST00000511439 A0A1W2PPE3 182 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 CEACAM18A8MTB9 384 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 TRDCB7Z8K6 153 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 F8VZ95 297 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 GPR171O14626 319 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LSM1O15116 133 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 AKR7A2O43488 359 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 H6PDO95479 791 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 NCK1P16333 377 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 RPL22P35268 128 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ARR3P36575 388 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ATP1B3P54709 279 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 PNOCQ13519 176 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ARL6IP1Q15041 203 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 MICBQ29980 383 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 HSP90AA4PQ58FG1 418 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LCE1CQ5T751 118 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LCE1BQ5T7P3 118 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 CPTPQ5TA50 214 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 DUPD1Q68J44 220 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 TMEM53Q6P2H8 277 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ABHD12BQ7Z5M8 362 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LRP11Q86VZ4 500 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LRRC28Q86X40 367 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LRRC6Q86X45 466 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LYPD6Q86Y78 171 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ERI1Q8IV48 349 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 NRMQ8IXM6 262 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LINC00301Q8NCQ3 95 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 OR8B3Q8NGG8 313 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 ZFP90Q8TF47 636 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 C7orf33Q8WU49 177 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 MITD1Q8WV92 249 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 SEC22AQ96IW7 307 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 OR8B2Q96RD0 313 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 CDCA4Q9BXL8 241 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 AICDAQ9GZX7 198 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 SPNS1Q9H2V7 528 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 NHEJ1Q9H9Q4 299 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 C20orf96Q9NUD7 363 aaPredicted RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 MS4A12Q9NXJ0 267 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 IL36GQ9NZH8 169 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 CD274Q9NZQ7 290 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 TAAR3PQ9P1P4 343 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 TMCO1Q9UM00 188 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 PRPF19Q9UMS4 504 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 CSDC2Q9Y534 153 aaKnown RBP2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 HEY1Q9Y5J3 304 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 PEX16Q9Y5Y5 336 aa2.36□□□□□ -2.03
TOPBP1-208ENST00000511439 LRP2P98164 4655 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 IGLV3-32A0A0A0MS00 114 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 ZNF701M0R085 212 aaPredicted RBP2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 PHYHO14832 338 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 NPFFO15130 113 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 CHST1O43916 411 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OR10H3O60404 316 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 MMP23AO75900 390 aa2.35□□□□□ -2.03
TOPBP1-208ENST00000511439 OR2F2O95006 317 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms