RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 CDRT4Q8N9R6 151 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 GATD1Q8NB37 220 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 TMEM239Q8WW34 195 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 OR5P3Q8WZ94 311 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 MAL2Q969L2 176 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 APOBEC3DQ96AK3 386 aaPredicted RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 UBE2WQ96B02 151 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 CCDC124Q96CT7 223 aaKnown RBP1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 CPB2Q96IY4 423 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 HIGD2AQ9BW72 106 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 TAPBPLQ9BX59 468 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 SUCNR1Q9BXA5 334 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 FBXL15Q9H469 300 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 CYB5R1Q9UHQ9 305 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 POMPQ9Y244 141 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 USH1CQ9Y6N9 552 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 U3KQK5 164 aa1.59□□□□□ -2.15
TRAPPC11-207ENST00000511409 PLXNB1O43157 2135 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 IGLV10-54A0A075B6I4 117 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 IGHV1-45A0A0A0MS14 117 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 IGHV2-26A0A0B4J1V2 119 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TRAV8-2A0A0B4J237 113 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 OR5H14A6NHG9 310 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 ZNF878C9JN71 531 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 J3QRE1 110 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 PSCAO43653 123 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 LDOC1O95751 146 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 GPR75O95800 540 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 PDYNP01213 254 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 GUSBP08236 651 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 CNTFRP26992 372 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TSPOP30536 169 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 LCN1P31025 176 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 GTF2H1P32780 548 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 PLTPP55058 493 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TNFRSF9Q07011 255 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 BAXQ07812 192 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 DHRS2Q13268 280 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 STX3Q13277 289 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TPBGQ13641 420 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 BSXQ3C1V8 233 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 SMARCD3Q6STE5 483 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 DGAT2L6Q6ZPD8 337 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TMPPEQ6ZT21 453 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 Q6ZT83 130 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 OLIG3Q7RTU3 272 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 PYURFQ96I23 114 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 PGLYRP3Q96LB9 341 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 KCNIP2Q9NS61 270 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 TAS2R13Q9NYV9 303 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 ZNF443Q9Y2A4 671 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 NLRC5Q86WI3 1866 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 POLR3AO14802 1390 aaPredicted RBP1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 ZNF407Q9C0G0 2248 aa1.58□□□□□ -2.16
TRAPPC11-207ENST00000511409 HIVEP2P31629 2446 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 SDHAF1A6NFY7 115 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 ARGFXA6NJG6 315 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 RNASEK-C17orf49H0YIS7 233 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 PLPP3O14495 311 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CDIPTO14735 213 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FABP7O15540 132 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 PDCD6O75340 191 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 SNAP29O95721 258 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CST4P01036 141 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CTSGP08311 255 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CGB3P0DN86 165 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CGB7P0DN87 165 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 ZNF3P17036 446 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 RHOAP61586 193 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CD164Q04900 197 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 CASP8Q14790 479 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FBXO48Q5FWF7 155 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 LAMTOR1Q6IAA8 161 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FAM183BPQ6ZVS7 135 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 KRTAP13-1Q8IUC0 172 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FER1L6-AS1Q8NA97 138 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 OR4A5Q8NH83 315 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 PDCD6IPQ8WUM4 868 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 OR5P2Q8WZ92 322 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 REEP6Q96HR9 211 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FAAP24Q9BTP7 215 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 TSSK6Q9BXA6 273 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 BCL2L14Q9BZR8 327 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 MFSD1Q9H3U5 465 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 MRM2Q9UI43 246 aaKnown RBP1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FADS3Q9Y5Q0 445 aa1.57□□□□□ -2.16
TRAPPC11-207ENST00000511409 FAM183AA6NL82 134 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 ZNF879B4DU55 563 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 F8VP50 259 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 SLC31A1O15431 190 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 EEF1E1O43324 174 aaKnown RBP1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 TCF21O43680 179 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 CDS2O95674 445 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 CA2P00918 260 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 GYPCP04921 128 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 CTLA4P16410 223 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 HSPA13P48723 471 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 AQP5P55064 265 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 FLOT2Q14254 428 aa1.56□□□□□ -2.16
TRAPPC11-207ENST00000511409 PSG3Q16557 428 aa1.56□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms