RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 C21orf33P30042 268 aaPredicted RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 GLP1RP43220 463 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 LOXL3P58215 753 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 ZP1P60852 638 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 MRPL28Q13084 256 aaKnown RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 CDK5R1Q15078 307 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 C17orf58Q2M2W7 97 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 PAN3Q58A45 887 aaKnown RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 KHDC1LQ5JSQ8 128 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 PARP16Q8N5Y8 322 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 RHOXF1Q8NHV9 184 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 TNFAIP8L1Q8WVP5 186 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 PHF21AQ96BD5 680 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 CPNE2Q96FN4 548 aaPredicted RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 C9orf16Q9BUW7 83 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 BARHL1Q9BZE3 327 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 INPP5EQ9NRR6 644 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 ERVK13-1Q9NX77 482 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 RPL36Q9Y3U8 105 aaKnown RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 TSSC4Q9Y5U2 329 aaPredicted RBP12.29□□□□□ -0.44
TPM3-219ENST00000509409 NOTCH3Q9UM47 2321 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 PLXNB1O43157 2135 aa12.29□□□□□ -0.44
TPM3-219ENST00000509409 E9PQ18 207 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 IGHV3-7P01780 117 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 IGLL1P15814 213 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 GABRB1P18505 474 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 SOX2P48431 317 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 RAB40BQ12829 278 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 RSU1Q15404 277 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 ZSCAN26Q16670 478 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 LTC4SQ16873 150 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 KLHL22Q53GT1 634 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 OR4X2Q8NGF9 303 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 OR9G1Q8NH87 305 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 MYDGFQ969H8 173 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 RPEQ96AT9 228 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 KRTAP3-3Q9BYR6 98 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 KRTAP3-2Q9BYR7 98 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 FAM192AQ9GZU8 254 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 AURKAIP1Q9NWT8 199 aaPredicted RBP12.28□□□□□ -0.44
TPM3-219ENST00000509409 KIF25Q9UIL4 384 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 ING4Q9UNL4 249 aa12.28□□□□□ -0.44
TPM3-219ENST00000509409 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
TPM3-219ENST00000509409 LOC100130705A0A1B0GUX0 176 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 OOSP1A8MZH6 123 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 LY6LH3BQJ8 138 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 HTR3BO95264 441 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 HES1Q14469 280 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 FOXB2Q5VYV0 432 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 WFDC9Q8NEX5 89 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 PXT1Q8NFP0 134 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 OR51T1Q8NGJ9 327 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 OR52I1Q8NGK6 324 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 OR13A1Q8NGR1 328 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 OR10K1Q8NGX5 313 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 RFESDQ8TAC1 157 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 CNIH3Q8TBE1 160 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 LEAP2Q969E1 77 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 TOMM40LQ969M1 308 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 PCDHB16Q9NRJ7 776 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 CALYQ9NYX4 217 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 IDI2-AS1Q9NZ38 188 aa12.27□□□□□ -0.45
TPM3-219ENST00000509409 A0A087X0M5 115 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 TRAV24A0A0B4J272 114 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 A0A1B0GX30 115 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 J3QR06 171 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 M0QZK8 103 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 GTF2A1P52655 376 aaPredicted RBP12.26□□□□□ -0.45
TPM3-219ENST00000509409 IL13RA2Q14627 380 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 TCTEX1D4Q5JR98 221 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 UTF1Q5T230 341 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 ELP2Q6IA86 826 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 HAVCR2Q8TDQ0 301 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 MRGPRDQ8TDS7 321 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 KIRREL1Q96J84 757 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 SLC29A1Q99808 456 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 FAM118AQ9NWS6 357 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 TAS2R4Q9NYW5 299 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 DSCAML1Q8TD84 2053 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 KIAA2026Q5HYC2 2103 aa12.26□□□□□ -0.45
TPM3-219ENST00000509409 GABRPO00591 440 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 CLIC3O95833 236 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 AMY1AP04745 511 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 AMY2AP04746 511 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 CD2P06729 351 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 SNRNP70P08621 437 aaKnown RBP12.25□□□□□ -0.45
TPM3-219ENST00000509409 CGB3P0DN86 165 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 CGB7P0DN87 165 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 GNG10P50151 68 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 HNF4GQ14541 408 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 PIGYQ3MUY2 71 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 C10orf99Q6UWK7 81 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 THNSL2Q86YJ6 484 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 OR51A2Q8NGJ7 313 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 GPR148Q8TDV2 347 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 S100A13Q99584 98 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 ZNF649Q9BS31 505 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 JAM3Q9BX67 310 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 METTL9Q9H1A3 318 aa12.25□□□□□ -0.45
TPM3-219ENST00000509409 NCOR1P1Q9H4R4 102 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms