RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 C19orf12Q9NSK7 152 aa7.53□□□□□ -1.2
NUP54-207ENST00000508583 TXNL4BQ9NX01 149 aaKnown RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 AK6Q9Y3D8 172 aaKnown RBP7.53□□□□□ -1.2
NUP54-207ENST00000508583 SVEP1Q4LDE5 3571 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 ODAMA1E959 279 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 IFITM5A6NNB3 132 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 NOTOA8MTQ0 251 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 HSPB6O14558 160 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 TCF21O43680 179 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 AIREO43918 545 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 FCN3O75636 299 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 MPIG6BO95866 241 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 AVPP01185 164 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 VSIG8P0DPA2 414 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 HOXB4P17483 251 aaPredicted RBP7.52□□□□□ -1.21
NUP54-207ENST00000508583 FUT3P21217 361 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 SCAND1P57086 179 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 TAF9Q16594 264 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 TMEM200BQ69YZ2 307 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 OR52W1Q6IF63 320 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 TRAT1Q6PIZ9 186 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 C1orf229Q6ZS94 237 aaPredicted RBP7.52□□□□□ -1.21
NUP54-207ENST00000508583 C9orf139Q6ZV77 190 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 USP43Q70EL4 1123 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 SUMF2Q8NBJ7 301 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 OR4S1Q8NGB4 309 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 OR13D1Q8NGV5 346 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 FAM46BQ96A09 425 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 FAM3DQ96BQ1 224 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 Q96M66 194 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 BANF2Q9H503 90 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 TAS2R3Q9NYW6 316 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 FBLN5Q9UBX5 448 aa7.52□□□□□ -1.21
NUP54-207ENST00000508583 ZFHX3Q15911 3703 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 ANK3Q12955 4377 aaKnown RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 MEIKINA0A087WXM9 373 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 TRAV24A0A0B4J272 114 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 IGHV1-69DA0A0B4J2H0 117 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 TMEM30CPA0ZSE6 113 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 METTL21EPA6NDL7 271 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 TMEM14DPA8MWL7 114 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 PDCD6O75340 191 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 CLPXO76031 633 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 SCGNO76038 276 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 IGHV1-69P01742 117 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 RAB6AP20340 208 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 GADD45AP24522 165 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 UBE2E1P51965 193 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 RPS27AP62979 156 aaKnown RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 AESQ08117 197 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 ATXN7L3Q14CW9 347 aaPredicted RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 SLC35E4Q6ICL7 350 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 RAB12Q6IQ22 244 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 FGFRL1Q8N441 504 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 TMEM104Q8NE00 496 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 OR56B1Q8NGI3 324 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 CORO2AQ92828 525 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 LHX4Q969G2 390 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 PTX4Q96A99 478 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 C1orf147Q96MC9 270 aaPredicted RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 TBX15Q96SF7 602 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 NKX3-1Q99801 234 aaPredicted RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 TM2D1Q9BX74 207 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 OR51E2Q9H255 320 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 ZMAT3Q9HA38 289 aaKnown RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 LIN7BQ9HAP6 207 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 RCC2Q9P258 522 aaKnown RBP7.51□□□□□ -1.21
NUP54-207ENST00000508583 RAB22AQ9UL26 194 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 FAM96BQ9Y3D0 163 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 PEX16Q9Y5Y5 336 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 DSCAML1Q8TD84 2053 aa7.51□□□□□ -1.21
NUP54-207ENST00000508583 JMJD1CQ15652 2540 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 CENPVL3A0A0U1RRI6 287 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 A0A1W2PP11 408 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 ZNF729A6NN14 1252 aaPredicted RBP7.5□□□□□ -1.21
NUP54-207ENST00000508583 POM121CA8CG34 1229 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 C17orf98A8MV24 154 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 PAHP00439 452 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 GZMHP20718 246 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 SDC2P34741 201 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 GLP1RP43220 463 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 LGALS4P56470 323 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 MRPS15P82914 257 aaKnown RBP7.5□□□□□ -1.21
NUP54-207ENST00000508583 QRFPP83859 136 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 ZNF273Q14593 569 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 ARL6IP1Q15041 203 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 P2RY14Q15391 338 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 KRTAP21-3Q3LHN1 58 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 TMEM30BQ3MIR4 351 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 MIDNQ504T8 468 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 KLF17Q5JT82 389 aaPredicted RBP7.5□□□□□ -1.21
NUP54-207ENST00000508583 C6orf183Q5T699 404 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 HES5Q5TA89 166 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 SFXN4Q6P4A7 337 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 HEPN1Q6WQI6 88 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 GPR141Q7Z602 305 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 ZNF554Q86TJ5 538 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 OR51D1Q8NGF3 324 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 OR13F1Q8NGS4 319 aa7.5□□□□□ -1.21
NUP54-207ENST00000508583 SLC25A28Q96A46 364 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms