RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TRAV18A0A075B6X5 111 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SAA2-SAA4A0A096LPE2 208 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 TRAV1-1A0A0B4J248 108 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 C13orf42A0A1B0GVH6 325 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 MAP1LC3B2A6NCE7 125 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ANTXRLA6NF34 631 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SERPINE3A8MV23 424 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF705FA8MVS1 300 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 EEF1E1-BLOC1S5C9J1V9 151 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 NPIPA7E9PJI5 369 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SLC17A2O00624 439 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 CCL22O00626 93 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 AGPAT2O15120 278 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 LATO43561 262 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 STK17BO94768 372 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 TBX18O95935 607 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ERCC1P07992 297 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF705DP0CH99 300 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF705BP0CI00 300 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 NPIPA8P0DM63 369 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 EPORP19235 508 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ACVR1BP36896 505 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SRP14P37108 136 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 AKR1C3P42330 323 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 CAPZBP47756 277 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 CSNK1A1P48729 337 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 RAB28P51157 221 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 EFNA3P52797 238 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 PRRX1P54821 245 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 LCN6P62502 163 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 PITX1P78337 314 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 MYBPHQ13203 477 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SMIM21Q3B7S5 101 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 OCIAD2Q56VL3 154 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF506Q5JVG8 444 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 CLEC12AQ5QGZ9 265 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 STAC2Q6ZMT1 411 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 FRRS1Q6ZNA5 592 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 TEX43Q6ZNM6 134 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 KCTD9Q7L273 389 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SERPINA9Q86WD7 417 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SGPP2Q8IWX5 399 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF679Q8IYX0 411 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 GBGT1Q8N5D6 347 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 TCTEX1D1Q8N7M0 179 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZSCAN4Q8NAM6 433 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZCCHC10Q8TBK6 192 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 RNASE8Q8TDE3 154 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 GPR119Q8TDV5 335 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 OR1E3Q8WZA6 343 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 AQP3Q92482 292 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 CDS1Q92903 461 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 GLYATL1Q969I3 302 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 PSMG2Q969U7 264 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 GMPPAQ96IJ6 420 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SEC22AQ96IW7 307 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 MS4A10Q96PG2 267 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 OR8B4Q96RC9 309 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 PYGO2Q9BRQ0 406 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 C20orf24Q9BUV8 137 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 GPR174Q9BXC1 333 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 PLA2G12AQ9BZM1 189 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 MAP1LC3BQ9GZQ8 125 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 OR52D1Q9H346 318 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 NOX4Q9NPH5 578 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF701Q9NV72 531 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 B3GAT1Q9P2W7 334 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SLC23A2Q9UGH3 650 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ZNF223Q9UK11 482 aaPredicted RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 ST3GAL6Q9Y274 331 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 MRPS16Q9Y3D3 137 aaKnown RBP3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 WIPI2Q9Y4P8 454 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 WSB1Q9Y6I7 421 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 SDK1Q7Z5N4 2213 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 NBEAQ8NFP9 2946 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 LAMA5O15230 3695 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 NLRC5Q86WI3 1866 aa3.92□□□□□ -1.78
PDLIM5-211ENST00000508531 IGLV5-37A0A075B6J1 123 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 IGHV2OR16-5A0A0B4J2B6 119 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TRBV5-5A0A0J9YX44 114 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CXorf51AA0A1B0GTR3 108 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 A0A1B0GU03 582 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SMIM28A0A1B0GU29 152 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TRAPPC2LH3BP13 241 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 LOC400499M0QZD8 3231 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 HMGN4O00479 90 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SOCS6O14544 535 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 GPR137BO60478 399 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SFT2D2O95562 160 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 PRB1P04280 392 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 TYMSP04818 313 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 OR5G3P0C626 314 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 IGF2RP11717 2491 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CD99P14209 185 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 SERPINA2P20848 420 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 NTSP30990 170 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 FCGR2CP31995 323 aa3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CNN1P51911 297 aaKnown RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 CRYBB1P53674 252 aaPredicted RBP3.91□□□□□ -1.78
PDLIM5-211ENST00000508531 OR12D2P58182 307 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms