RNA–Protein interactions for RNA: ENST00000508459.5

HMGCLL1-208, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 884 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-208ENST00000508459 CARTPTQ16568 116 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 TRAPPC6BQ86SZ2 158 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 GAPTQ8N292 157 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 SEH1LQ96EE3 360 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 ABHD1Q96SE0 405 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 RBMX2Q9Y388 322 aaKnown RBP12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 TENM4Q6N022 2769 aa12.06□□□□□ -0.48
HMGCLL1-208ENST00000508459 TRGV10A0A0A0MS01 117 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 A0A0A6YYD4 124 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SSX4O60224 188 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 RPS2P15880 293 aaKnown RBP12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 EGR1P18146 543 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 COL8A2P25067 703 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 DUSP1P28562 367 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 ECI1P42126 302 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 ZNF79Q15937 498 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 DEFB113Q30KQ7 82 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 MOGAT2Q3SYC2 334 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 ESCO2Q56NI9 601 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 PLAC9Q5JTB6 97 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 KRBOX4Q5JUW0 171 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SFRP4Q6FHJ7 346 aaPredicted RBP12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SIGIRRQ6IA17 410 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 ZNF497Q6ZNH5 498 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 TMEM229BQ8NBD8 167 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 DEFB108BQ8NET1 73 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 TMEM185AQ8NFB2 350 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 YIPF5Q969M3 257 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 TMEM246Q9BRR3 403 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 FAAP24Q9BTP7 215 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 GAL3ST2Q9H3Q3 398 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 COPZ2Q9P299 210 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SLC25A10Q9UBX3 287 aaPredicted RBP12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 SLC23A1Q9UHI7 598 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 AK3Q9UIJ7 227 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 TRAPPC2LQ9UL33 140 aa12.05□□□□□ -0.48
HMGCLL1-208ENST00000508459 ZNF736B4DX44 427 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 SPINT2O43291 252 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 ZNF737O75373 536 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 NAPSAO96009 420 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 IGHV4-39P01824 125 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 GYPAP02724 150 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 IFNA6P05013 189 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 IL7P13232 177 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 NAT1P18440 290 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 OR3A3P47888 321 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 P2RX3P56373 397 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 ARPC4P59998 168 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 CHRFAM7AQ494W8 412 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 ZNF57Q68EA5 555 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 HOGA1Q86XE5 327 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 IZUMO1Q8IYV9 350 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 OR10A7Q8NGE5 316 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 LURAP1Q96LR2 239 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 PPA2Q9H2U2 334 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 CLN8Q9UBY8 286 aa12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 UBE2J1Q9Y385 318 aaPredicted RBP12.04□□□□□ -0.48
HMGCLL1-208ENST00000508459 UBE2QL1A1L167 161 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 ORC5O43913 435 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 LIPFP07098 398 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 FCGR3AP08637 254 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 AKAIN1P0CW23 69 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 AMY2BP19961 511 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 COL8A1P27658 744 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 GDNFP39905 211 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 OR3A1P47881 315 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 PLA2G7Q13093 441 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 SPRNQ5BIV9 151 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 RNASE10Q5GAN6 216 aaKnown RBP12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 STEAP3Q658P3 488 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 C17orf107Q6ZR85 190 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 CD177Q8N6Q3 437 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 MINDY2Q8NBR6 621 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 BEST4Q8NFU0 473 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 OR4A4PQ8NGN8 299 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 OR52I2Q8NH67 350 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 SCGB3A2Q96PL1 93 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 GAFA1Q96PS6 74 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 PRRT1Q99946 306 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 PATZ1Q9HBE1 687 aaKnown RBP12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 NECAP2Q9NVZ3 263 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 TAS2R3Q9NYW6 316 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 SCP2D1Q9UJQ7 156 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 ANAPC10Q9UM13 185 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 CACNG2Q9Y698 323 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 LINC00312Q9Y6C7 94 aa12.03□□□□□ -0.48
HMGCLL1-208ENST00000508459 GCN1Q92616 2671 aaKnown RBP12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 IGHV3OR15-7A0A075B7D8 119 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 MEIKINA0A087WXM9 373 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 ANKRD20A5PA0PJZ0 165 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 ODAMA1E959 279 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 CEACAM18A8MTB9 384 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 DISC1C4P0D8 188 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 RGS11O94810 467 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 RBP4P02753 201 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 MT-ND4P03905 459 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 NDUFB7P17568 137 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 GLP1RP43220 463 aa12.02□□□□□ -0.49
HMGCLL1-208ENST00000508459 GNB2P62879 340 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms