RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 HPGDSO60760 199 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TOXO94900 526 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR2T7P0C7T2 308 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 G0S2P27469 103 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OPRK1P41145 380 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MFAP4P55083 255 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ERVFRD-1P60508 538 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MFGE8Q08431 387 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 TAF9Q16594 264 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ECSCRQ19T08 205 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 Q1RN00 199 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PHLDA2Q53GA4 152 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ELFN2Q5R3F8 820 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 NHLRC1Q6VVB1 395 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR8J2Q8NGG1 315 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 OR4C13Q8NGP0 309 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF596Q8TC21 504 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 DYNC2LI1Q8TCX1 351 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 IL22RA2Q969J5 263 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 TMEM106AQ96A25 262 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SPSB4Q96A44 273 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MEGF10Q96KG7 1140 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SDF2Q99470 211 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SOX7Q9BT81 388 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 PLEKHA2Q9HB19 425 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 INPP5EQ9NRR6 644 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 LIN7CQ9NUP9 197 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 LGALS13Q9UHV8 139 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 GMDSO60547 372 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 LMX1BO60663 402 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CYB5R3P00387 301 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 HBE1P02100 147 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZNF735P0CB33 412 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 HTN3P15516 51 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ZBTB25P24278 435 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ACKR3P25106 362 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC6A12P48065 614 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 RAB7AP51149 207 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CLDN20P56880 219 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 CDK5R2Q13319 367 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 LCE2DQ5TA82 110 aaPredicted RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 MRPL14Q6P1L8 145 aaKnown RBP2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC25A42Q86VD7 318 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 HSD17B11Q8NBQ5 300 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC16A11Q8NCK7 471 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC7A13Q8TCU3 470 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MAGIXQ9H6Y5 334 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 MOB1AQ9H8S9 216 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 NOX4Q9NPH5 578 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 SLC17A5Q9NRA2 495 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 ICAM5Q9UMF0 924 aa2.58□□□□□ -2
NEDD4-208ENST00000508342 M0R1X1 148 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 AIPO00170 330 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF26P17031 533 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 GABRA5P31644 462 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TIMP3P35625 211 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 NR4A2P43354 598 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 WNT4P56705 351 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 RPL30P62888 115 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 MS4A2Q01362 244 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ID3Q02535 119 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ACVR1Q04771 509 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PNLIPRP3Q17RR3 467 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZNF404Q494X3 552 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR2T2Q6IF00 324 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 EPGNQ6UW88 154 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR8I2Q8N0Y5 310 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC38A9Q8NBW4 561 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1M1Q8NGA1 313 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1L4Q8NGR5 311 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 Q96M85 177 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 NMNAT3Q96T66 252 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 C20orf85Q9H1P6 137 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PPIAL4AQ9Y536 164 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 AQP7P3A6NL99 342 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SS18L1O75177 396 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 WT1P19544 449 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 HTR2CP28335 458 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 GRNP28799 593 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 SDHAP31040 664 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TFPI2P48307 235 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 AMTP48728 403 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 HTR6P50406 440 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 MRPS10P82664 201 aaKnown RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 SKP2Q13309 424 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 PGGHGQ32M88 737 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 ZBTB37Q5TC79 503 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TMEM81Q6P7N7 255 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 LINC00518Q8N0U6 118 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR10P1Q8NGE3 313 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR9Q2Q8NGE9 314 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 OR1K1Q8NGR3 316 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 VSTM2AQ8TAG5 236 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SLC25A40Q8TBP6 338 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 TMEM255BQ8WV15 326 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 CIB3Q96Q77 187 aaPredicted RBP2.57□□□□□ -2
NEDD4-208ENST00000508342 MIEN1Q9BRT3 115 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 SYT11Q9BT88 431 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 HSF4Q9ULV5 492 aa2.57□□□□□ -2
NEDD4-208ENST00000508342 STUB1Q9UNE7 303 aa2.57□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 90.4 ms