RNA–Protein interactions for RNA: ENST00000507257.5

NUP54-205, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 1,938 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-205ENST00000507257 KNL1Q8NG31 2342 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 IGHV1OR21-1A0A087WYE8 117 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 TRBV11-1A0A0K0K1C0 115 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A10PA6NDY2 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A18PA6NE21 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A16PA6NEW6 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A20PA6NIJ5 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A8PA6NJQ4 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A7PA6NKC0 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A22PA8MWA6 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A12PA8MX19 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A5PA8MXJ8 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A23PA8MXZ1 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 ADAM20O43506 726 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 TMEM50AO95807 157 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A15PP0C7V4 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A13PP0C7W8 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A14PP0C7W9 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM90A24PP0C7X0 464 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 SLC25A6P12236 298 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 NDUFB7P17568 137 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 FAM27BQ5VT28 67 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 Q6ZPA2 131 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 TMEM123Q8N131 208 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 OR2V1Q8NHB1 315 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 TECTBQ96PL2 329 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 NDUFAF3Q9BU61 184 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 PLEK2Q9NYT0 353 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 RNF115Q9Y4L5 304 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 TRANK1O15050 2925 aa15.32■□□□□ 0.04
NUP54-205ENST00000507257 IGKV1-12A0A0C4DH73 117 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 A0A1W2PR77 199 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 IGKV1D-12P01611 117 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PGA5P0DJD9 388 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 FUT3P21217 361 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 MRPS34P82930 218 aaKnown RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 RAB35Q15286 201 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PHYHD1Q5SRE7 291 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 UNQ6494/PRO21346Q6UXR6 183 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 CPEB2Q7Z5Q1 589 aaKnown RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 TGIF2LYQ8IUE0 185 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 DMRTC2Q8IXT2 367 aaPredicted RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 SUMF1Q8NBK3 374 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 OR10A7Q8NGE5 316 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 THAP3Q8WTV1 239 aaPredicted RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 CA5BP1Q8WTZ4 195 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 DNASE2BQ8WZ79 361 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 AGMATQ9BSE5 352 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PSMG3Q9BT73 122 aaPredicted RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 GPR87Q9BY21 358 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 CA14Q9ULX7 337 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 ST3GAL6Q9Y274 331 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 A0A087WZY1 265 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 SHISA7A6NL88 538 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 CST7O76096 145 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 GCGP01275 180 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 GZMBP10144 247 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 FUT6P51993 359 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PAX9P55771 341 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 RAB11AP62491 216 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 RUNX1Q01196 453 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 KRTAP27-1Q3LI81 207 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PIGYQ3MUY2 71 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 MAML2Q8IZL2 1156 aaPredicted RBP15.31■□□□□ 0.04
NUP54-205ENST00000507257 Q8NFD4 153 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 OR5D13Q8NGL4 314 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 DYRK2Q92630 601 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 LURAP1Q96LR2 239 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 CABLES2Q9BTV7 478 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 PRO1933Q9H354 126 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 ADAMTS20P59510 1910 aa15.31■□□□□ 0.04
NUP54-205ENST00000507257 DKK1O94907 266 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 IFNA5P01569 189 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 RBM11P57052 281 aaKnown RBP15.3■□□□□ 0.04
NUP54-205ENST00000507257 CFHR1Q03591 330 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 RHBDD2Q6NTF9 364 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 SLC25A26Q70HW3 274 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 C20orf196Q8IYI0 205 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 OR10G3Q8NGC4 313 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 OR4X1Q8NH49 305 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 NEU1Q99519 415 aa15.3■□□□□ 0.04
NUP54-205ENST00000507257 DUX1O43812 170 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 ZFAND5O76080 213 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 OPN1LWP04000 364 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 WNT2P09544 360 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 CD38P28907 300 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 PDLIM4P50479 330 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 ZNF385CQ66K41 422 aaPredicted RBP15.29■□□□□ 0.04
NUP54-205ENST00000507257 CENPVQ7Z7K6 275 aaPredicted RBP15.29■□□□□ 0.04
NUP54-205ENST00000507257 SNX22Q96L94 193 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 TPSD1Q9BZJ3 242 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 FGF21Q9NSA1 209 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 P4HTMQ9NXG6 502 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 GNG13Q9P2W3 67 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 MYOTQ9UBF9 498 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 CD207Q9UJ71 328 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 H0Y980 276 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 SYNGR3O43761 229 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 CHST1O43916 411 aa15.29■□□□□ 0.04
NUP54-205ENST00000507257 TUSC2O75896 110 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms