RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 GALP22466 123 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 PEBP1P30086 187 aaKnown RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 CCR7P32248 378 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 DEKP35659 375 aaKnown RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 ATP5OP48047 213 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 ZNF140P52738 457 aaPredicted RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 MYL5Q02045 173 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 CLEC12BQ2HXU8 276 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 FAM83EQ2M2I3 478 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 HSP90AA4PQ58FG1 418 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 BEX5Q5H9J7 111 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 METTL21CQ5VZV1 264 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 C4orf22Q6V702 233 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 CDKL3Q8IVW4 592 aaPredicted RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 GABRG1Q8N1C3 465 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 C2orf73Q8N5S3 287 aaPredicted RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 TMEM251Q8N6I4 163 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 TTLQ8NG68 377 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 OR13C4Q8NGS5 318 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 LINC01560Q8TB33 94 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 ABHD3Q8WU67 409 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 MED18Q9BUE0 208 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 PARP12Q9H0J9 701 aaKnown RBP3.62□□□□□ -1.83
HERC4-213ENST00000506515 FAM96AQ9H5X1 160 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 TMEM165Q9HC07 324 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 FAM215AQ9Y5M1 114 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 KCNE3Q9Y6H6 103 aa3.62□□□□□ -1.83
HERC4-213ENST00000506515 NINQ8N4C6 2090 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 CADP27708 2225 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 UQCRHLA0A096LP55 91 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 SERTM2A0A1B0GWG4 89 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 E5RI56 91 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 APOC4-APOC2K7ER74 178 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 SPOPO43791 374 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 TRAPPC6AO75865 159 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 MYO1DO94832 1006 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 APOC2P02655 101 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 C1QAP02745 245 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 EIF4EP06730 217 aaKnown RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 SERPINE2P07093 398 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 ERCC1P07992 297 aaPredicted RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 TPM1P09493 284 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 ERGP11308 486 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 RPS3P23396 243 aaKnown RBP eCLIP3.61□□□□□ -1.83
HERC4-213ENST00000506515 MRPL19P49406 292 aaKnown RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 SARNPP82979 210 aaKnown RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 STX4Q12846 297 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 CDH17Q12864 832 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 TRAM2Q15035 370 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 GPR107Q5VW38 600 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 TMEM53Q6P2H8 277 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 FBXW12Q6X9E4 464 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 OFCC1Q8IZS5 231 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 LRRC25Q8N386 305 aaPredicted RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 C15orf56Q8N910 161 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 NOXO1Q8NFA2 376 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 LRRC29Q8WV35 223 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 ZNF681Q96N22 645 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 PRAP1Q96NZ9 151 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 NDFIP1Q9BT67 221 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 TSGA10Q9BZW7 698 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 RPP21Q9H633 154 aaKnown RBP3.61□□□□□ -1.83
HERC4-213ENST00000506515 CCNB1IP1Q9NPC3 277 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 MTCH1Q9NZJ7 389 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 TAC3Q9UHF0 121 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 HEATR5AQ86XA9 2040 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 FREM1Q5H8C1 2179 aa3.61□□□□□ -1.83
HERC4-213ENST00000506515 NOTCH1P46531 2555 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 EML6Q6ZMW3 1958 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 IGLV1-36A0A0B4J1U3 117 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 GOLGA8TH3BQL2 631 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 UBFD1O14562 309 aaKnown RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 CHST10O43529 356 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 TCF21O43680 179 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 CTNSO60931 367 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 ZNF324O75467 553 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 PSIP1O75475 530 aaKnown RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 CBR3O75828 277 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 OR2J2O76002 312 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 IFNA16P05015 189 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 ARG1P05089 322 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 C8GP07360 202 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 SERPINA6P08185 405 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 UBTFL6P0CB48 400 aaPredicted RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 SLC25A16P16260 332 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 IL1RNP18510 177 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 CRYGSP22914 178 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 STOMP27105 288 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 HMOX2P30519 316 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 CD79BP40259 229 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 RFC3P40938 356 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 DYNLT1P63172 113 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 PSPHP78330 225 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 POU6F1Q14863 301 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 BCL2A1Q16548 175 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 SSX9Q7RTT3 188 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 C3orf56Q8N813 242 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 APCDD1LQ8NCL9 501 aa3.6□□□□□ -1.83
HERC4-213ENST00000506515 TSEN15Q8WW01 171 aaKnown RBP3.6□□□□□ -1.83
HERC4-213ENST00000506515 QKIQ96PU8 341 aaKnown RBP eCLIP3.6□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms