RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 DLX1P56177 255 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 LGALS4P56470 323 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 PRB3Q04118 309 aaPredicted RBP13.63□□□□□ -0.23
SNCA-209ENST00000506244 SLC9A3R2Q15599 337 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 KCTD21Q4G0X4 260 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 UBE2UQ5VVX9 321 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 ZNF773Q6PK81 442 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 ZNF782Q6ZMW2 699 aaPredicted RBP13.63□□□□□ -0.23
SNCA-209ENST00000506244 LRRTM1Q86UE6 522 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 LYPD6Q86Y78 171 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 C11orf42Q8N5U0 333 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 COQ2Q96H96 371 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 DPCDQ9BVM2 203 aaPredicted RBP13.63□□□□□ -0.23
SNCA-209ENST00000506244 DPAGT1Q9H3H5 408 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 NCOR1P1Q9H4R4 102 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 SESN1Q9Y6P5 492 aa13.63□□□□□ -0.23
SNCA-209ENST00000506244 A0A1W2PRD5 423 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 A0A1W2PRF3 423 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 A0A1W2PRM7 423 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A10PA6NDY2 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A18PA6NE21 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A16PA6NEW6 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A20PA6NIJ5 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A8PA6NJQ4 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A7PA6NKC0 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A22PA8MWA6 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A12PA8MX19 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A5PA8MXJ8 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A23PA8MXZ1 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 CCRL2O00421 344 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 GEMIN2O14893 280 aaKnown RBP13.62□□□□□ -0.23
SNCA-209ENST00000506244 CRTAPO75718 401 aaPredicted RBP13.62□□□□□ -0.23
SNCA-209ENST00000506244 MELTFP08582 738 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A15PP0C7V4 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A13PP0C7W8 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A14PP0C7W9 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 FAM90A24PP0C7X0 464 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 MGMTP16455 207 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 COX7A1P24310 79 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 PSMB9P28065 219 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 GLIPR1P48060 266 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 OR52W1Q6IF63 320 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 HCP5Q6MZN7 132 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 TMEM91Q6ZNR0 172 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 SPARTQ8N0X7 666 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 SUMF2Q8NBJ7 301 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 OR6M1Q8NGM8 313 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 CORO2AQ92828 525 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 C1orf147Q96MC9 270 aaPredicted RBP13.62□□□□□ -0.23
SNCA-209ENST00000506244 DUX5Q96PT3 197 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 ZNRD1Q9P1U0 126 aa13.62□□□□□ -0.23
SNCA-209ENST00000506244 SOX21Q9Y651 276 aaPredicted RBP13.62□□□□□ -0.23
SNCA-209ENST00000506244 MEIKINA0A087WXM9 373 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 MEX3AA1L020 520 aaKnown RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 ZNF729A6NN14 1252 aaPredicted RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 GALP22466 123 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 CALRP27797 417 aaKnown RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 HTR2CP28335 458 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 GLP1RP43220 463 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 GP2P55259 537 aaKnown RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 FABP5Q01469 135 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 SSX1Q16384 188 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 C1orf100Q5SVJ3 147 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 ATAD3CQ5T2N8 411 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 HEPN1Q6WQI6 88 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 PNKDQ8N490 385 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 ZNF565Q8N9K5 539 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 NEK7Q8TDX7 302 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 GCDHQ92947 438 aaPredicted RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 SELENOIQ9C0D9 397 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 ING3Q9NXR8 418 aa13.61□□□□□ -0.23
SNCA-209ENST00000506244 TBL2Q9Y4P3 447 aaKnown RBP13.61□□□□□ -0.23
SNCA-209ENST00000506244 A0A1W2PP11 408 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 TMEM30CPA0ZSE6 113 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 MYL9P24844 172 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 PSMD7P51665 324 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 RPL15P61313 204 aaKnown RBP13.6□□□□□ -0.23
SNCA-209ENST00000506244 RBM39Q14498 530 aaKnown RBP13.6□□□□□ -0.23
SNCA-209ENST00000506244 TAF9Q16594 264 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 BEND2Q8NDZ0 799 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 OR5R1Q8NH85 324 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 Q96M66 194 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 PPIL3Q9H2H8 161 aaKnown RBP13.6□□□□□ -0.23
SNCA-209ENST00000506244 TMEM133Q9H2Q1 129 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 PLGRKTQ9HBL7 147 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 RCC2Q9P258 522 aaKnown RBP13.6□□□□□ -0.23
SNCA-209ENST00000506244 KIF25Q9UIL4 384 aa13.6□□□□□ -0.23
SNCA-209ENST00000506244 ODF3BA8MYP8 253 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 PDCD5O14737 125 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 SLC22A1O15245 554 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 BPNT1O95861 308 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 ARG1P05089 322 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 CDK2P24941 298 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 IER3P46695 156 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 RSBN1Q5VWQ0 802 aaPredicted RBP13.59□□□□□ -0.23
SNCA-209ENST00000506244 ZNF626Q68DY1 528 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 C16orf87Q6PH81 154 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 CD200R1LQ6Q8B3 271 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 OR11H6Q8NGC7 330 aa13.59□□□□□ -0.23
SNCA-209ENST00000506244 KCNG3Q8TAE7 436 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms