RNA–Protein interactions for RNA: ENST00000505659.1

HMGB1P29-201, Transcript of high mobility group box 1 pseudogene 29, humanhuman

BASIC

Gene HMGB1P29, Length 499 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P29-201ENST00000505659 ZNF707Q96C28 371 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 B9D2Q9BPU9 175 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 ANAPC13Q9BS18 74 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 COPS4Q9BT78 406 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SHCBP1LQ9BZQ2 653 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 TM6SF2Q9BZW4 377 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF436Q9C0F3 470 aaPredicted RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 CHRNA10Q9GZZ6 450 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR2D2Q9H210 308 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 CXCL16Q9H2A7 254 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SYT4Q9H2B2 425 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 FBXO44Q9H4M3 255 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 PLEKHA1Q9HB21 404 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 DDIT4Q9NX09 232 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SDHAF2Q9NX18 166 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 RBM12B-AS1Q9P1G2 102 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC22A14Q9Y267 594 aa0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 BZW2Q9Y6E2 419 aaKnown RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 MDC1Q14676 2089 aaKnown RBP0.68□□□□□ -2.3
HMGB1P29-201ENST00000505659 NRCAMQ92823 1304 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 KIF27Q86VH2 1401 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 SDK1Q7Z5N4 2213 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ERICH4A6NGS2 130 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 RFXANKO14593 260 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 SPOPO43791 374 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 GMDSO60547 372 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 PDYNP01213 254 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CRYGCP07315 174 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 SOD3P08294 240 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CECR9P0C854 216 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 LIPCP11150 499 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 GABRA1P14867 456 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 STX4Q12846 297 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 DYNC1I2Q13409 638 aaKnown RBP0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CASP8Q14790 479 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 VAMP3Q15836 100 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 GOLGA7BQ2TAP0 167 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CEACAM16Q2WEN9 425 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 HNRNPA1L2Q32P51 320 aaKnown RBP0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 NDUFAF6Q330K2 333 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 Q499Y3 187 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 NKAIN1Q4KMZ8 207 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 NIPAL1Q6NVV3 410 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 C16orf87Q6PH81 154 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ASCL4Q6XD76 172 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 TPGS1Q6ZTW0 290 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 FAM58AQ8N1B3 248 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZNF321PQ8N8H1 164 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ASCC1Q8N9N2 400 aaKnown RBP0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 OR2M3Q8NG83 312 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 BLNKQ8WV28 456 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 TWIST2Q8WVJ9 160 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CDKL2Q92772 493 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CIB1Q99828 191 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 APOL4Q9BPW4 351 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 UTP23Q9BRU9 249 aaKnown RBP0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 NXF2Q9GZY0 626 aaKnown RBP0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ANKHQ9HCJ1 492 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 ACOT13Q9NPJ3 140 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 CYB5R1Q9UHQ9 305 aa0.67□□□□□ -2.3
HMGB1P29-201ENST00000505659 MYO15BQ96JP2 1530 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 TRBV24-1A0A075B6N3 115 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 A0A1B0GTI1 187 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 PGPA6NDG6 321 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 TVP23AA6NH52 213 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ODF3BA8MYP8 253 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 KLRC4-KLRK1H3BQV0 150 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 TP53I11O14683 189 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 UBDO15205 165 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 KDELR3O43731 214 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 POP7O75817 140 aaKnown RBP0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 SOX14O95416 240 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 GPR75O95800 540 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CD8AP01732 235 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ANGP03950 147 aaKnown RBP0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 GUSBP08236 651 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 GIMD1P0DJR0 217 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 LYNX1P0DP58 116 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC2A1P11166 492 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 PTNP21246 168 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 BGNP21810 368 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CPN2P22792 545 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 S100A2P29034 98 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 RANBP1P43487 201 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CBX5P45973 191 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 TTPAP49638 278 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 RAB38P57729 211 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 RAB25P57735 213 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ZCWPW2Q504Y3 356 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ACTBL2Q562R1 376 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 CAVIN4Q5BKX8 364 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 N4BP2L1Q5TBK1 243 aaPredicted RBP0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 RESP18Q5W5W9 173 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 SLC25A25Q6KCM7 469 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ERICH5Q6P6B1 374 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 SSX6Q7RTT6 188 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 PID1Q7Z2X4 250 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 GALNT10Q86SR1 603 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 GAPTQ8N292 157 aa0.66□□□□□ -2.3
HMGB1P29-201ENST00000505659 ATPAF2Q8N5M1 289 aa0.66□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms