RNA–Protein interactions for RNA: ENST00000505045.1

CDH9-203, Transcript of cadherin 9, humanhuman

TSL 1 (best)

Gene CDH9, Length 1,801 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH9-203ENST00000505045 MLST8Q9BVC4 326 aa3.91□□□□□ -1.78
CDH9-203ENST00000505045 DPAGT1Q9H3H5 408 aa3.91□□□□□ -1.78
CDH9-203ENST00000505045 S100A14Q9HCY8 104 aa3.91□□□□□ -1.78
CDH9-203ENST00000505045 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.91□□□□□ -1.78
CDH9-203ENST00000505045 GMPPBQ9Y5P6 360 aa3.91□□□□□ -1.78
CDH9-203ENST00000505045 A0A1B0GUS0 222 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 DAPL1A0PJW8 107 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 HSPB6O14558 160 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR2H2O95918 312 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 LALBAP00709 142 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ARG1P05089 322 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ISG15P05161 165 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 LIMS3P0CW19 117 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 LIMS4P0CW20 117 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ZNF728P0DKX0 622 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 PRKACAP17612 351 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ATF1P18846 271 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 RBP2P50120 134 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 FUT6P51993 359 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 MTCP1P56278 107 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ACTA2P62736 377 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ACTG2P63267 376 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ACTC1P68032 377 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ACTA1P68133 377 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 TMED1Q13445 227 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 MED21Q13503 144 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ZNF146Q15072 292 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 GRK1Q15835 563 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 SSX2Q16385 188 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 PRAMEF5Q5TYX0 476 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR2G6Q5TZ20 316 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 IZUMO2Q6UXV1 221 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 GDPGP1Q6ZNW5 385 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 UTS2BQ765I0 119 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 LYG1Q8N1E2 194 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 PQLC1Q8N2U9 271 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ACBD7Q8N6N7 88 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR52I1Q8NGK6 324 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR13C3Q8NGS6 347 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR13C5Q8NGS8 318 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 OR5R1Q8NH85 324 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 CNIH3Q8TBE1 160 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 TRUB1Q8WWH5 349 aaKnown RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 PP6455Q8WZ26 134 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 DGCR14Q96DF8 476 aaKnown RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 RBMXL1Q96E39 390 aaKnown RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 COQ2Q96H96 371 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ZNF714Q96N38 554 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 FAM234AQ9H0X4 552 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 PPIL3Q9H2H8 161 aaKnown RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 C16orf95Q9H693 158 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 ZNF702PQ9H963 129 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 PTTG2Q9NZH5 202 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 BLOC1S6Q9UL45 172 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 SLC7A11Q9UPY5 501 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 EXOGQ9Y2C4 368 aaKnown RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 GSTK1Q9Y2Q3 226 aa3.9□□□□□ -1.79
CDH9-203ENST00000505045 SIRT4Q9Y6E7 314 aaPredicted RBP3.9□□□□□ -1.79
CDH9-203ENST00000505045 IGHV2-26A0A0B4J1V2 119 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 BTBD17A6NE02 478 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 KDM4BO94953 1096 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 HTR1AP08908 422 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 GABRR1P24046 479 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 CD24P25063 80 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 PEX2P28328 305 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 GABRA5P31644 462 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 TGFBR2P37173 567 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 GLIPR1P48060 266 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 SOX2P48431 317 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 P2RX3P56373 397 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 AESQ08117 197 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 PDZK1IP1Q13113 114 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 ALKBH1Q13686 389 aaKnown RBP3.89□□□□□ -1.79
CDH9-203ENST00000505045 GALEQ14376 348 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 ATXN7L3Q14CW9 347 aaPredicted RBP3.89□□□□□ -1.79
CDH9-203ENST00000505045 CDK5R1Q15078 307 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 CNN3Q15417 329 aaKnown RBP3.89□□□□□ -1.79
CDH9-203ENST00000505045 FAM189A2Q15884 450 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 LRRC36Q1X8D7 754 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 ZFP1Q6P2D0 407 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 Q6P435 159 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 GDPD3Q7L5L3 318 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 FAM58AQ8N1B3 248 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 KLHDC1Q8N7A1 406 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 ZNF676Q8N7Q3 588 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 DNAAF1Q8NEP3 725 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 OR11H6Q8NGC7 330 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 OR4P4Q8NGL7 312 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 OR10K1Q8NGX5 313 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 RHOXF1Q8NHV9 184 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 WIPF2Q8TF74 440 aaPredicted RBP3.89□□□□□ -1.79
CDH9-203ENST00000505045 SPSB1Q96BD6 273 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 C10orf35Q96D05 121 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 OR5M11Q96RB7 305 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 ADI1Q9BV57 179 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 CDCA4Q9BXL8 241 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 TCF7L1Q9HCS4 588 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 HMG20AQ9NP66 347 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 SERTAD4Q9NUC0 356 aa3.89□□□□□ -1.79
CDH9-203ENST00000505045 FAM118AQ9NWS6 357 aa3.89□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms