RNA–Protein interactions for RNA: ENST00000504627.1

SQSTM1-209, Transcript of sequestosome 1, humanhuman

TSL 5

Gene SQSTM1, Length 602 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-209ENST00000504627 SRRM5B3KS81 715 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 NDUFB3O43676 98 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 CRYBA1P05813 215 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L2P0CJ85 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L3P0CJ86 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L4P0CJ87 422 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L5P0CJ88 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L6P0CJ89 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L7P0CJ90 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 PTBP1P26599 531 aaKnown RBP eCLIP14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 IKZF1Q13422 519 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 LRRC10Q5BKY1 277 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4L9Q6RFH8 374 aaPredicted RBP14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 SLC25A26Q70HW3 274 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 MKXQ8IYA7 352 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 CMTM4Q8IZR5 234 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 FAM216BQ8N7L0 139 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 SCCPDHQ8NBX0 429 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 OR5T2Q8NGG2 359 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 OR10Z1Q8NGY1 313 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 UNKLQ9H9P5 680 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 ONECUT1Q9UBC0 465 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 DUX4Q9UBX2 424 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 RPUSD1Q9UJJ7 312 aaKnown RBP14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 ING4Q9UNL4 249 aa14.84□□□□□ -0.03
SQSTM1-209ENST00000504627 NKX6-3A6NJ46 265 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 AKR7A2O43488 359 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 ANGPTL7O43827 346 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 FCN3O75636 299 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 TPPPO94811 219 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 KDM4BO94953 1096 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 SERPINA2P20848 420 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 RSU1Q15404 277 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 OR10K2Q6IF99 312 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 Q6YL49 198 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 FGFRL1Q8N441 504 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 OR4M1Q8NGD0 313 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 TAF15Q92804 592 aaKnown RBP eCLIP14.83□□□□□ -0.044e-7■□□□□ 10.7
SQSTM1-209ENST00000504627 MRPS24Q96EL2 167 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 S100A16Q96FQ6 103 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 URM1Q9BTM9 101 aaKnown RBP14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 SIRPDQ9H106 197 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 PRDM13Q9H4Q3 707 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 ELL3Q9HB65 397 aaPredicted RBP14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 RHOFQ9HBH0 211 aa14.83□□□□□ -0.04
SQSTM1-209ENST00000504627 IGHV1-69DA0A0B4J2H0 117 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 IGKV1-12A0A0C4DH73 117 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 METTL21EPA6NDL7 271 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 FABP12A6NFH5 140 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 GPR37O15354 613 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 CRTAPO75718 401 aaPredicted RBP14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 MPIG6BO95866 241 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 IGKV1D-12P01611 117 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 IGHV1-69P01742 117 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 CSTBP04080 98 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 MGMTP16455 207 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 OMGP23515 440 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 CD40LGP29965 261 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 MNDAP41218 407 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 EFNB2P52799 333 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 PLA2G7Q13093 441 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 STUMQ69YW2 141 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 ELP2Q6IA86 826 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 RAB12Q6IQ22 244 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 FAM131AQ6UXB0 335 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 PDZD9Q8IXQ8 264 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 Q8IYB0 196 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 TMEM104Q8NE00 496 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 Q8NFD4 153 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 AQP3Q92482 292 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 H1FXQ92522 213 aaKnown RBP14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 FAM46BQ96A09 425 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 SOSTQ9BQB4 213 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 TM2D1Q9BX74 207 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 WDR13Q9H1Z4 485 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 KPTNQ9Y664 436 aa14.82□□□□□ -0.04
SQSTM1-209ENST00000504627 FAM181BA6NEQ2 426 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 POM121CA8CG34 1229 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 ACAA1P09110 424 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 GTF2F2P13984 249 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 GLRA1P23415 457 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 RPS27AP62979 156 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 ATPAF1Q5TC12 328 aaPredicted RBP14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 PYHIN1Q6K0P9 492 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 FIP1L1Q6UN15 594 aaKnown RBP14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 VMO1Q7Z5L0 202 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 OR10K1Q8NGX5 313 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 SLAMF9Q96A28 289 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 PHF21AQ96BD5 680 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 MED30Q96HR3 178 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 DNTTIP1Q9H147 329 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 DIABLOQ9NR28 239 aa14.81□□□□□ -0.04
SQSTM1-209ENST00000504627 A0A1W2PP11 408 aa14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 SYNGR1O43759 233 aa14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 HTR3BO95264 441 aa14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 MELTFP08582 738 aa14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 PGA5P0DJD9 388 aa14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 MDKP21741 143 aaPredicted RBP14.8□□□□□ -0.04
SQSTM1-209ENST00000504627 CDK2P24941 298 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms