RNA–Protein interactions for RNA: ENST00000502998.1

CLCN3-203, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 3

Gene CLCN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-203ENST00000502998 RUNX3Q13761 415 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR8B8Q15620 311 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 UPP1Q16831 310 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 DCAF4L1Q3SXM0 396 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 ALG10Q5BKT4 473 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SOHLH1Q5JUK2 328 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FAM102AQ5T9C2 384 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 LYPLAL1Q5VWZ2 237 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SLC23A3Q6PIS1 610 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF621Q6ZSS3 439 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 DOK3Q7L591 496 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 TMPRSS11BQ86T26 416 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 CA13Q8N1Q1 262 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR51T1Q8NGJ9 327 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR52I1Q8NGK6 324 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR52I2Q8NH67 350 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 MFSD8Q8NHS3 518 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SLC25A40Q8TBP6 338 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SMIM4Q8WVI0 70 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PP6455Q8WZ26 134 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 PPCDCQ96CD2 204 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SNRNP40Q96DI7 357 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF681Q96N22 645 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OXGR1Q96P68 337 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 LRRC3BQ96PB8 259 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 RAB40CQ96S21 281 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SPAG8Q99932 426 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 HSPB9Q9BQS6 159 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 MCRIP2Q9BUT9 160 aaKnown RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SLC17A9Q9BYT1 436 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 NMNAT2Q9BZQ4 307 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR51I1Q9H343 314 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR51I2Q9H344 312 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 SDR39U1Q9NRG7 319 aaPredicted RBP5.67□□□□□ -1.5
CLCN3-203ENST00000502998 OR1A1Q9P1Q5 309 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FBLN5Q9UBX5 448 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FBXL17Q9UF56 701 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 FBXW11Q9UKB1 542 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 DHDHQ9UQ10 334 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 NAV2Q8IVL1 2488 aa5.67□□□□□ -1.5
CLCN3-203ENST00000502998 VWA8A3KMH1 1905 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 hCG_1818297A0A087WSY0 165 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SMIM28A0A1B0GU29 152 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SPAARA0A1B0GVQ0 90 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 FAM95CA0A1B0GW59 222 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 CDC14CA4D256 554 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 A6NDN8 102 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TLCD2A6NGC4 264 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF860A6NHJ4 632 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 C9JQL5 133 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF561-AS1K7EIQ3 104 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ETV2O00321 342 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 CCL16O15467 120 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 NKX2-8O15522 239 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 MLNRO43193 412 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 HYPMO75409 117 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 MPZL1O95297 269 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 HLA-AP01891 365 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 HLA-DPB1P04440 258 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 WNT1P04628 370 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 AKAIN1P0CW23 69 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TFPIP10646 304 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 EGR1P18146 543 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 FBLP22087 321 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TSPOP30536 169 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 GDF5P43026 501 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 KIR2DL2P43627 348 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 XCR1P46094 333 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 OR1D4P47884 311 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 FOXA1P55317 472 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 WNT3AP56704 352 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TPPP2P59282 170 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 RHOAP61586 193 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ADAM8P78325 824 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 DGCR2P98153 550 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 PLP2Q04941 152 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 BCL2L1Q07817 233 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TP53I3Q53FA7 332 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM97Q5BJF2 176 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 PPM1JQ5JR12 505 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM211Q6ICI0 200 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 KCNIP4Q6PIL6 250 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ARL9Q6T311 187 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 RSPO2Q6UXX9 243 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 C1orf174Q8IYL3 243 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ZNF683Q8IZ20 524 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TMEM151AQ8N4L1 468 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ZADH2Q8N4Q0 377 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 C8orf31Q8N9H6 132 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 OR2T33Q8NG76 320 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 OR2G3Q8NGZ4 309 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 OCC1Q8TAD7 63 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 ZMYND19Q96E35 227 aaPredicted RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 TVP23CQ96ET8 276 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SDSLQ96GA7 329 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SLC25A33Q9BSK2 321 aa5.66□□□□□ -1.5
CLCN3-203ENST00000502998 RPP25Q9BUL9 199 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 SNRNP25Q9BV90 132 aaKnown RBP5.66□□□□□ -1.5
CLCN3-203ENST00000502998 C1QTNF4Q9BXJ3 329 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms