RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 IGKV3-11P04433 115 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 CST2P09228 141 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 HERV-K104P61576 105 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 RAB11AP62491 216 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 FMODQ06828 376 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 MPV17LQ2QL34 196 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 RD3Q7Z3Z2 195 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 RTN4RL2Q86UN3 420 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 CISD2Q8N5K1 135 aaKnown RBP9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 IL22RA1Q8N6P7 574 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 OR2V1Q8NHB1 315 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 IL22RA2Q969J5 263 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 PINX1Q96BK5 328 aaKnown RBP9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 Q96M66 194 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 SNHG12Q9BXW3 62 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 MRPL13Q9BYD1 178 aaKnown RBP9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 VN1R1Q9GZP7 353 aa9.56□□□□□ -0.88
AC055717.1-201ENST00000502221 IGKV1-9A0A0C4DH69 117 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 KIR2DL5BA0A0G2JN68 375 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 KIR2DL5BA0A0G2JPC4 375 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 A0A1B0GV50 99 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 METTL12A8MUP2 240 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 DHRS3O75911 302 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TNFP01375 233 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 IGHG1P01857 330 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TYMSP04818 313 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 PFN1P07737 140 aaKnown RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 DBHP09172 617 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SNRPCP09234 159 aaKnown RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF17P17021 662 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF25P17030 456 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SRP14P37108 136 aaKnown RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SERF2P84101 59 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 POU3F1Q03052 451 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 PLCXD2Q0VAA5 305 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 C4orf17Q53FE4 359 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 KIR2DL5AQ8N109 375 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 NAXEQ8NCW5 288 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 OR5C1Q8NGR4 320 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SPSB1Q96BD6 273 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 MMABQ96EY8 250 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 FAM71F1Q96KD3 344 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SPACA5Q96QH8 159 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TMEM222Q9H0R3 208 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 MCTS1Q9ULC4 181 aaKnown RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 MPDZO75970 2070 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 USP24Q9UPU5 2620 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 C3orf85A0A1B0GTC6 90 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 A0A1W2PP11 408 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 IGSF23A1L1A6 192 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 ANKUB1A6NFN9 424 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 STMND1H3BQB6 276 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 ETV2O00321 342 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 PHF1O43189 567 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SLC25A6P12236 298 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 HLA-DOBP13765 273 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TNFSF10P50591 281 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 CLRN1P58418 232 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 LCN2P80188 198 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 COL10A1Q03692 680 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SRSF7Q16629 238 aaKnown RBP eCLIP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TMEM241Q24JQ0 296 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 CYP2G1PQ6ZSU1 146 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF695Q8IW36 515 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 SHISA5Q8N114 240 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TOMM40LQ969M1 308 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 TSACCQ96A04 125 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 PARD6GQ9BYG4 376 aaPredicted RBP9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 CHRNA10Q9GZZ6 450 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 LHFPL6Q9Y693 200 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 CFAP47Q6ZTR5 3102 aa9.55□□□□□ -0.88
AC055717.1-201ENST00000502221 CHD8Q9HCK8 2581 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 TNFSF12-TNFSF13A0A0A6YY99 330 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 EREGO14944 169 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 MPPED1O15442 326 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 IL18BPO95998 194 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 FGF5P12034 268 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 FCGR2AP12318 317 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 HNRNPA2B1P22626 353 aaKnown RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 BIDP55957 195 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 HNRNPKP61978 463 aaKnown RBP eCLIP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 HIST1H3AP68431 136 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 ID3Q02535 119 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 EXT1Q16394 746 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 SP6Q3SY56 376 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 NCR3LG1Q68D85 454 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF787Q6DD87 383 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 KCNIP4Q6PIL6 250 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF66Q6ZN08 573 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 MRPL41Q8IXM3 137 aaKnown RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 CCL4L1Q8NHW4 92 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 SCGB1C1Q8TD33 95 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 ZNF721Q8TF20 911 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 PGAM5Q96HS1 289 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 FAM60AQ9NP50 221 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 PNO1Q9NRX1 252 aaKnown RBP9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 GPR173Q9NS66 373 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 FKBP11Q9NYL4 201 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 GNG13Q9P2W3 67 aa9.54□□□□□ -0.88
AC055717.1-201ENST00000502221 COPS7AQ9UBW8 275 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms