RNA–Protein interactions for RNA: ENST00000498722.2

LMNA-217, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 1,348 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-217ENST00000498722 BTN2A1Q7KYR7 527 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 MUC20Q8N307 709 aaPredicted RBP13.52□□□□□ -0.25
LMNA-217ENST00000498722 Q8NFD4 153 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 CHAC2Q8WUX2 184 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 PECRQ9BY49 303 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.25
LMNA-217ENST00000498722 RNF7Q9UBF6 113 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 HSF4Q9ULV5 492 aa13.52□□□□□ -0.25
LMNA-217ENST00000498722 FN1P02751 2386 aaKnown RBP13.52□□□□□ -0.25
LMNA-217ENST00000498722 PPIAL4EA0A075B759 164 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 IGKV1-12A0A0C4DH73 117 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 MEIS3P1A6NDR6 274 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 PPIAL4DF5H284 164 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 INMT-MINDY4F8WBC2 141 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 DHFRP00374 187 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 IGKV1D-12P01611 117 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 IGHV2-5P01817 119 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 PPIAL4FP0DN26 164 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 GABRR1P24046 479 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 RAG2P55895 527 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 IL24Q13007 206 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 ARFRP1Q13795 201 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 PLAC9Q5JTB6 97 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 STEAP1BQ6NZ63 245 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 Q8TCH9 128 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 ARHGAP5-AS1Q96IT6 56 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 PLEKHJ1Q9NW61 149 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 MCUBQ9NWR8 336 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 PPIAL4AQ9Y536 164 aa13.51□□□□□ -0.25
LMNA-217ENST00000498722 ZNF736B4DX44 427 aaPredicted RBP13.5□□□□□ -0.25
LMNA-217ENST00000498722 J3QT63 122 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 TBPP20226 339 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 MPZP25189 248 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 RBM11P57052 281 aaKnown RBP13.5□□□□□ -0.25
LMNA-217ENST00000498722 ZNF154Q13106 437 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 MEF2DQ14814 521 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 TMEM155Q4W5P6 130 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 NHLRC3Q5JS37 347 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 SFRP4Q6FHJ7 346 aaPredicted RBP13.5□□□□□ -0.25
LMNA-217ENST00000498722 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
LMNA-217ENST00000498722 WDR86Q86TI4 376 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 ZNF554Q86TJ5 538 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 LINC00596Q86U02 117 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 GLCCI1Q86VQ1 547 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 DEFB108BQ8NET1 73 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 OR4C16Q8NGL9 310 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 UPRTQ96BW1 309 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 OR51I2Q9H344 312 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 ST3GAL6Q9Y274 331 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 POLDIP2Q9Y2S7 368 aa13.5□□□□□ -0.25
LMNA-217ENST00000498722 C3orf80F5H4A9 247 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 RAB3DO95716 219 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 PTBP3O95758 552 aaKnown RBP13.49□□□□□ -0.25
LMNA-217ENST00000498722 CD74P04233 296 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 SFTPBP07988 381 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 MSMBP08118 114 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 RPS2P15880 293 aaKnown RBP13.49□□□□□ -0.25
LMNA-217ENST00000498722 BCL3P20749 454 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 CD80P33681 288 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 CCR6P51684 374 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 GMFBP60983 142 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 FGF12P61328 243 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 HOXA4Q00056 320 aaPredicted RBP13.49□□□□□ -0.25
LMNA-217ENST00000498722 ACTBL2Q562R1 376 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 FAM76BQ5HYJ3 339 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 HAGHLQ6PII5 290 aaPredicted RBP13.49□□□□□ -0.25
LMNA-217ENST00000498722 Q8IYB0 196 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 OR56B4Q8NH76 319 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 LRRC29Q8WV35 223 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 NUDCD2Q8WVJ2 157 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 ST8SIA4Q92187 359 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 SLAMF9Q96A28 289 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 OCSTAMPQ9BR26 566 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 ELF5Q9UKW6 265 aaPredicted RBP13.49□□□□□ -0.25
LMNA-217ENST00000498722 ANAPC10Q9UM13 185 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 KCNK7Q9Y2U2 307 aa13.49□□□□□ -0.25
LMNA-217ENST00000498722 DISC1C4P0D8 188 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 CDIPTO14735 213 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 CD3DP04234 171 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 H2AFB2P0C5Z0 115 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 TRAPPC2P0DI81 140 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 TRAPPC2BP0DI82 140 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 NAT1P18440 290 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 HLA-DMAP28067 261 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 LCN2P80188 198 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 MRPS15P82914 257 aaKnown RBP13.48□□□□□ -0.25
LMNA-217ENST00000498722 RBMS2Q15434 407 aaKnown RBP13.48□□□□□ -0.25
LMNA-217ENST00000498722 TAF9Q16594 264 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 TATDN3Q17R31 274 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 MPV17LQ2QL34 196 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 SCCPDHQ8NBX0 429 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 TMEM186Q96B77 213 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 TMEM246Q9BRR3 403 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 SHARPINQ9H0F6 387 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 PATZ1Q9HBE1 687 aaKnown RBP13.48□□□□□ -0.25
LMNA-217ENST00000498722 NUDT15Q9NV35 164 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 HIF1ANQ9NWT6 349 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 NF1P21359 2839 aa13.48□□□□□ -0.25
LMNA-217ENST00000498722 ZFHX3Q15911 3703 aa13.47□□□□□ -0.25
LMNA-217ENST00000498722 CEACAM18A8MTB9 384 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms