RNA–Protein interactions for RNA: ENST00000498678.5

HOXB3-212, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HOXB3, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-212ENST00000498678 RNASE6Q93091 150 aaKnown RBP21.99■■□□□ 1.11
HOXB3-212ENST00000498678 C1orf123Q9NWV4 160 aa21.99■■□□□ 1.11
HOXB3-212ENST00000498678 OR5H8P0DN80 308 aa21.99■■□□□ 1.11
HOXB3-212ENST00000498678 HOXA4Q00056 320 aaPredicted RBP21.99■■□□□ 1.11
HOXB3-212ENST00000498678 RBM39Q14498 530 aaKnown RBP21.99■■□□□ 1.11
HOXB3-212ENST00000498678 SRSF7Q16629 238 aaKnown RBP eCLIP21.99■■□□□ 1.11
HOXB3-212ENST00000498678 ZNF660Q6AZW8 331 aaPredicted RBP21.99■■□□□ 1.11
HOXB3-212ENST00000498678 Q6ZS49 121 aa21.99■■□□□ 1.11
HOXB3-212ENST00000498678 Q9N2K0 584 aa21.99■■□□□ 1.11
HOXB3-212ENST00000498678 MEIKINA0A087WXM9 373 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 OR5H14A6NHG9 310 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SH2D1BO14796 132 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SPRY3O43610 288 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SCO1O75880 301 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 C1QBP02746 253 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SNTB1Q13884 538 aaKnown RBP21.98■■□□□ 1.11
HOXB3-212ENST00000498678 CDSNQ15517 529 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SPRNQ5BIV9 151 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 ADAD2Q8NCV1 583 aaKnown RBP21.98■■□□□ 1.11
HOXB3-212ENST00000498678 MARC2Q969Z3 335 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 ATP23Q9Y6H3 246 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 TPRP12270 2363 aaKnown RBP21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SLC33A1O00400 549 aaPredicted RBP21.98■■□□□ 1.11
HOXB3-212ENST00000498678 ACP7Q6ZNF0 438 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 PEG10Q86TG7 708 aaKnown RBP21.98■■□□□ 1.11
HOXB3-212ENST00000498678 SPICQ8N5J4 248 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 MEGF10Q96KG7 1140 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 OR2V2Q96R30 315 aa21.98■■□□□ 1.11
HOXB3-212ENST00000498678 NBEAQ8NFP9 2946 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 hCG_1807616A0A1W2PRN6 198 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 SIRPB1O00241 398 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 TSPAN4O14817 238 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ANXA3P12429 323 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ZNF81P51508 661 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 FIP1L1Q6UN15 594 aaKnown RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 DHRS11Q6UWP2 260 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 LILRB2Q8N423 598 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ZNF2Q9BSG1 426 aaPredicted RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 LIME1Q9H400 295 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 RIMS4Q9H426 269 aaPredicted RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 C5orf66Q9H5L9 145 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 GLRA1P23415 457 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 FPR2P25090 351 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 GRNP28799 593 aaKnown RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 RBMXP38159 391 aaKnown RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 UBE2MP61081 183 aaKnown RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 DHRS2Q13268 280 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ADIPOQQ15848 244 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 NCMAPQ5T1S8 102 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ADAM5Q6NVV9 412 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 FAHD2BQ6P2I3 314 aaPredicted RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 MRPL30Q8TCC3 161 aaKnown RBP21.97■■□□□ 1.11
HOXB3-212ENST00000498678 FAHD2AQ96GK7 314 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 MGAT4CQ9UBM8 478 aa21.97■■□□□ 1.11
HOXB3-212ENST00000498678 ZBTB25P24278 435 aa21.96■■□□□ 1.11
HOXB3-212ENST00000498678 PAN3Q58A45 887 aaKnown RBP21.96■■□□□ 1.11
HOXB3-212ENST00000498678 C20orf204Q6ZNR8 217 aa21.96■■□□□ 1.11
HOXB3-212ENST00000498678 SCGB3A2Q96PL1 93 aa21.96■■□□□ 1.11
HOXB3-212ENST00000498678 NPTNQ9Y639 398 aa21.96■■□□□ 1.11
HOXB3-212ENST00000498678 COL6A6A6NMZ7 2263 aa21.96■■□□□ 1.11
HOXB3-212ENST00000498678 TRBV6-6A0A0A6YYG2 114 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 SMLR1H3BR10 107 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 HAND1O96004 215 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 PPP1R1AQ13522 171 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 LRRC29Q8WV35 223 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 ZNF436Q9C0F3 470 aaPredicted RBP21.95■■□□□ 1.1
HOXB3-212ENST00000498678 ESRP2Q9H6T0 727 aaKnown RBP21.95■■□□□ 1.1
HOXB3-212ENST00000498678 OR14J1Q9UGF5 321 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 ERRFI1Q9UJM3 462 aaPredicted RBP21.95■■□□□ 1.1
HOXB3-212ENST00000498678 OR4A8P0C604 315 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 LINC01560Q8TB33 94 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 ITLN1Q8WWA0 313 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 RTBDNQ9BSG5 229 aaPredicted RBP21.95■■□□□ 1.1
HOXB3-212ENST00000498678 PLCE1Q9P212 2302 aa21.95■■□□□ 1.1
HOXB3-212ENST00000498678 FABP7O15540 132 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 IGHV1-46P01743 117 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 AKR1C4P17516 323 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 CFHR2P36980 270 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 CEBPDP49716 269 aaPredicted RBP21.94■■□□□ 1.1
HOXB3-212ENST00000498678 TMEM185AQ8NFB2 350 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 OR2AK2Q8NG84 335 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 CA5BP1Q8WTZ4 195 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 TMPRSS13Q9BYE2 586 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 DECR2Q9NUI1 292 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 DCAF16Q9NXF7 216 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 NDRG3Q9UGV2 375 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 I3L521 148 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 SLC22A5O76082 557 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 ZNF205O95201 554 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 HLA-AP01891 365 aaKnown RBP21.94■■□□□ 1.1
HOXB3-212ENST00000498678 LMO1P25800 156 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 SURF2Q15527 256 aaPredicted RBP21.94■■□□□ 1.1
HOXB3-212ENST00000498678 C2orf68Q2NKX9 166 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 C5orf24Q7Z6I8 188 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 LYG2Q86SG7 212 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 UXS1Q8NBZ7 420 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 PLPPR2Q96GM1 343 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 TREM2Q9NZC2 230 aa21.94■■□□□ 1.1
HOXB3-212ENST00000498678 NBASA2RRP1 2371 aa21.93■■□□□ 1.1
HOXB3-212ENST00000498678 CHD3Q12873 2000 aaKnown RBP21.93■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms