RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 DNASE2O00115 360 aaPredicted RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 FADS1O60427 444 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 PLIN3O60664 434 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SCO1O75880 301 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DCTN3O75935 186 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 OR2J2O76002 312 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 IFNGP01579 166 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DNAH10OSP0CZ25 163 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SCGB1A1P11684 91 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 GTF2F2P13984 249 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ERP29P30040 261 aaKnown RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 ADORA1P30542 326 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DRD3P35462 400 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ARR3P36575 388 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 GALR1P47211 349 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SERPINB10P48595 397 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 IDH3GP51553 393 aaPredicted RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 CLDN12P56749 244 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TAS2R41P59536 307 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DNAJB13P59910 316 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TFAMQ00059 246 aaKnown RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 C2orf80Q0P641 193 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 MLLT11Q13015 90 aaPredicted RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 OR1Q1Q15612 314 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DEFB116Q30KQ4 102 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TIMM23BQ5SRD1 257 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 C9orf64Q5T6V5 341 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TSPO2Q5TGU0 170 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 FAHD1Q6P587 224 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 DHRS4L2Q6PKH6 230 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TMPRSS11AQ6ZMR5 421 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SLC16A13Q7RTY0 426 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TMED4Q7Z7H5 227 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 TMEM25Q86YD3 366 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SLC34A3Q8N130 599 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 EIF4E3Q8N5X7 224 aaKnown RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 ZNF645Q8N7E2 425 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 CYB561D1Q8N8Q1 229 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 UBAC2Q8NBM4 344 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ST6GALNAC3Q8NDV1 305 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 OR52P1PQ8NH57 321 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 COQ8AQ8NI60 647 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 CD200R1Q8TD46 325 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 RXFP4Q8TDU9 374 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 NAT14Q8WUY8 206 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 GHSRQ92847 366 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 PTX4Q96A99 478 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SFRP2Q96HF1 295 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ZNF488Q96MN9 340 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ZNF382Q96SR6 550 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 HBEGFQ99075 208 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 MRPS26Q9BYN8 205 aaKnown RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 ARV1Q9H2C2 271 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 BIN3Q9NQY0 253 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SLC2A9Q9NRM0 540 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 FGFR1OP2Q9NVK5 253 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 RBFOX1Q9NWB1 397 aaKnown RBP2.4□□□□□ -2.03
CALD1-224ENST00000498254 MAT2BQ9NZL9 334 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 RAB26Q9ULW5 256 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ZNF257Q9Y2Q1 563 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 KLF12Q9Y4X4 402 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 ARL5AQ9Y689 179 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 UNC79Q9P2D8 2635 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 NCOA1Q15788 1441 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 SPEF2Q9C093 1822 aa2.4□□□□□ -2.03
CALD1-224ENST00000498254 MAGI1Q96QZ7 1491 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 FLT4P35916 1363 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 ANKRD36BQ8N2N9 1353 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 DOCK8Q8NF50 2099 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 IGHV3OR16-9A0A0B4J2B5 98 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C5orf63A6NC05 138 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 C21orf140B9A014 251 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 KPNA4O00629 521 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 BHLHE40O14503 412 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 PHYHO14832 338 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SLC16A4O15374 487 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SHOX2O60902 331 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 SPAG7O75391 227 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SLC22A5O76082 557 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 GLSO94925 669 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 MPZL1O95297 269 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 FAM107AO95990 144 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 IGF2P01344 180 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 LIPCP11150 499 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 MUC1P15941 1255 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 IGFBP3P17936 291 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 MDKP21741 143 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 CXCR1P25024 350 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 PAX6P26367 422 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SLC6A1P30531 599 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 GNRHRP30968 328 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 CA5AP35218 305 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 AKR1C3P42330 323 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 PRLHRP49683 370 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 RHOAP61586 193 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 SLC35A1P78382 337 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 RPL18AQ02543 176 aaKnown RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 ST3GAL4Q11206 333 aa2.39□□□□□ -2.03
CALD1-224ENST00000498254 MAD2L1BPQ15013 274 aaPredicted RBP2.39□□□□□ -2.03
CALD1-224ENST00000498254 PTGES3Q15185 160 aaKnown RBP2.39□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms