RNA–Protein interactions for RNA: ENST00000498056.1

CPNE1-227, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 362 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-227ENST00000498056 PLAC9Q5JTB6 97 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 KRBOX4Q5JUW0 171 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF841Q6ZN19 808 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 Q6ZTK2 550 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 BTN2A1Q7KYR7 527 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 FAM89BQ8N5H3 189 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 OR4M1Q8NGD0 313 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 S100A16Q96FQ6 103 aaKnown RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 COQ2Q96H96 371 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 PECRQ9BY49 303 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 ABCG5Q9H222 651 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 MIXL1Q9H2W2 232 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 ZMAT3Q9HA38 289 aaKnown RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 SEBOXQ9HB31 216 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 CHMP1AQ9HD42 196 aaPredicted RBP11.25□□□□□ -0.61
CPNE1-227ENST00000498056 DIABLOQ9NR28 239 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 C19orf12Q9NSK7 152 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 EXTL2Q9UBQ6 330 aa11.25□□□□□ -0.61
CPNE1-227ENST00000498056 ABCA1O95477 2261 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 KIAA1324LA8MWY0 1029 aaPredicted RBP11.24□□□□□ -0.61
CPNE1-227ENST00000498056 A8MXK9 166 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 C22orf46C9J442 243 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 MFNGO00587 321 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 CTDSP2O14595 271 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 CSN2P05814 226 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 MSMBP08118 114 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 IGHV4-31P0DP07 118 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 S100A5P33763 92 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 KCNJ3P48549 501 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 P2RX3P56373 397 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 MRPS15P82914 257 aaKnown RBP11.24□□□□□ -0.61
CPNE1-227ENST00000498056 OLFML2AQ68BL7 652 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 CNIH2Q6PI25 160 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 TRAPPC6BQ86SZ2 158 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 OR5D13Q8NGL4 314 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 POM121Q96HA1 1249 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 COX4I2Q96KJ9 171 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 FAAP24Q9BTP7 215 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 NXF2Q9GZY0 626 aaKnown RBP11.24□□□□□ -0.61
CPNE1-227ENST00000498056 SHARPINQ9H0F6 387 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 PTTG2Q9NZH5 202 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 AK3Q9UIJ7 227 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 KIF25Q9UIL4 384 aa11.24□□□□□ -0.61
CPNE1-227ENST00000498056 TRAV18A0A075B6X5 111 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 LOC105371242A0A075B767 164 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 MEIKINA0A087WXM9 373 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 TMEM30CPA0ZSE6 113 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 FUOMA2VDF0 154 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 TMEM235A6NFC5 223 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 ZFP36P26651 326 aaKnown RBP11.23□□□□□ -0.61
CPNE1-227ENST00000498056 MNDAP41218 407 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 GLIPR1P48060 266 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 GZMKP49863 264 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 TAS2R20P59543 309 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 RPL31P62899 125 aaKnown RBP11.23□□□□□ -0.61
CPNE1-227ENST00000498056 ARFRP1Q13795 201 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 RSBN1Q5VWQ0 802 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-227ENST00000498056 SETD6Q8TBK2 473 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 GCDHQ92947 438 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-227ENST00000498056 CMTM3Q96MX0 182 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 HDHD3Q9BSH5 251 aaPredicted RBP11.23□□□□□ -0.61
CPNE1-227ENST00000498056 DCTN5Q9BTE1 182 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 MMP27Q9H306 513 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 C12orf4Q9NQ89 552 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 HSF4Q9ULV5 492 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 A3GALT2U3KPV4 340 aa11.23□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF469Q96JG9 3925 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 TRBV23-1A0A0A0MS06 115 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 A0A0A6YYH2 397 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ODAMA1E959 279 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 A6NJ64 397 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 SERPINE3A8MV23 424 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 B4DSR2 109 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ENSAO43768 121 aaKnown RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 CLPXO76031 633 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 CD3GP09693 182 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 TMEM50BP56557 158 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 GNG2P59768 71 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ZNF273Q14593 569 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ARL6IP1Q15041 203 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 CD276Q5ZPR3 534 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 GLCCI1Q86VQ1 547 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 SNX29P2Q8IUI4 249 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 LINC01356Q8N9X3 169 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 OR4K15Q8NH41 348 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 NUDCD2Q8WVJ2 157 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 DIRAS2Q96HU8 199 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 WDFY2Q96P53 400 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 CMSS1Q9BQ75 279 aaKnown RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 NUDT16L1Q9BRJ7 211 aaKnown RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ONECUT1Q9UBC0 465 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 LPAR3Q9UBY5 353 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 RPUSD1Q9UJJ7 312 aaKnown RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 ELF5Q9UKW6 265 aaPredicted RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 TRAPPC2LQ9UL33 140 aa11.22□□□□□ -0.61
CPNE1-227ENST00000498056 MRPS7Q9Y2R9 242 aaKnown RBP11.22□□□□□ -0.61
CPNE1-227ENST00000498056 TEX15Q9BXT5 2789 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 TRGV10A0A0A0MS01 117 aa11.21□□□□□ -0.61
CPNE1-227ENST00000498056 TRAV39A0A0B4J263 110 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms