RNA–Protein interactions for RNA: ENST00000497722.2

PSPC1-205, Transcript of paraspeckle component 1, humanhuman

TSL 2

Gene PSPC1, Length 448 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-205ENST00000497722 OR12D1P0DN82 309 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 GABRA1P14867 456 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 CRABP1P29762 137 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 HSPA13P48723 471 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 UBE2KP61086 200 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 TNNC1P63316 161 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 VAMP3Q15836 100 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 CEACAM16Q2WEN9 425 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 PYCR3Q53H96 274 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 GLYATQ6IB77 296 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 NIPAL1Q6NVV3 410 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 C16orf87Q6PH81 154 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 TPGS1Q6ZTW0 290 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 LYPD6Q86Y78 171 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 SYS1Q8N2H4 156 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 GATD1Q8NB37 220 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 OR2M3Q8NG83 312 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 OR4K17Q8NGC6 315 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 LMX1AQ8TE12 382 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.41□□□□□ -2.18
PSPC1-205ENST00000497722 CCL17Q92583 94 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 CIDECQ96AQ7 238 aaPredicted RBP1.41□□□□□ -2.18
PSPC1-205ENST00000497722 CATSPER2Q96P56 530 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 HINT2Q9BX68 163 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 ARL6Q9H0F7 186 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 HAUS4Q9H6D7 363 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 TUBA4BQ9H853 241 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 TAS2R9Q9NYW1 312 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 POMPQ9Y244 141 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 MYO16Q9Y6X6 1858 aa1.41□□□□□ -2.18
PSPC1-205ENST00000497722 POLR3AO14802 1390 aaPredicted RBP1.4□□□□□ -2.19
PSPC1-205ENST00000497722 TRAV8-2A0A0B4J237 113 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 A0A1W2PNM2 257 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 J3QKU1 62 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 hCG_2039718K7EN88 272 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 SH2D1AO60880 128 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 CD8AP01732 235 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 PSKH1P11801 424 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 IFI30P13284 250 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 CSRP1P21291 193 aaKnown RBP1.4□□□□□ -2.19
PSPC1-205ENST00000497722 GCLMP48507 274 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 CARD18P57730 90 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 TSPAN5P62079 268 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 TSPAN31Q12999 210 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 TRAM1Q15629 374 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 ZNF181Q2M3W8 571 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 ACSBG2Q5FVE4 666 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 ACTL10Q5JWF8 245 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 ELP2Q6IA86 826 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 NIT1Q86X76 327 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 RBM45Q8IUH3 476 aaKnown RBP1.4□□□□□ -2.19
PSPC1-205ENST00000497722 OR52K1Q8NGK4 314 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 OR5C1Q8NGR4 320 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 LGALS14Q8TCE9 139 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 RAD51AP1Q96B01 352 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 C20orf166-AS1Q96NR2 134 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 OR5V1Q9UGF6 321 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 URGCP-MRPS24S4R325 110 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 NOS1P29475 1434 aa1.4□□□□□ -2.19
PSPC1-205ENST00000497722 IGHV2-26A0A0B4J1V2 119 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 K7EQS6 105 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 NDUFS8O00217 210 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 OVOL1O14753 267 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 IGKV1-16P04430 117 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 SPNP16150 400 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CTLA4P16410 223 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 ZNF3P17036 446 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 AKR1C4P17516 323 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 ATP5J2P56134 94 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CASP8Q14790 479 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 SPNS3Q6ZMD2 512 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 DGAT2L6Q6ZPD8 337 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CCDC121Q6ZUS5 278 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 OR10D4PQ8NGN7 298 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 OR4A5Q8NH83 315 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CACNG8Q8WXS5 425 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 MAL2Q969L2 176 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CLDN23Q96B33 292 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CMBLQ96DG6 245 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 REEP6Q96HR9 211 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 KLF6Q99612 283 aaPredicted RBP1.39□□□□□ -2.19
PSPC1-205ENST00000497722 TAPBPLQ9BX59 468 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 SUCNR1Q9BXA5 334 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 GOLPH3Q9H4A6 298 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 STMN3Q9NZ72 180 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 SLC23A2Q9UGH3 650 aa1.39□□□□□ -2.19
PSPC1-205ENST00000497722 CHTOPQ9Y3Y2 248 aaKnown RBP1.39□□□□□ -2.19
PSPC1-205ENST00000497722 TRGV4A0A0C4DH28 118 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 A0A1B0GU33 70 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 A0A1B0GW15 77 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 VAPBO95292 243 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 SNAP29O95721 258 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 CA2P00918 260 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 OPN1SWP03999 348 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 IGKV5-2P06315 115 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 ZNF22P17026 224 aaPredicted RBP1.38□□□□□ -2.19
PSPC1-205ENST00000497722 CNTFRP26992 372 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 GABRA3P34903 492 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 RHOAP61586 193 aa1.38□□□□□ -2.19
PSPC1-205ENST00000497722 PRDX1Q06830 199 aaKnown RBP1.38□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms