RNA–Protein interactions for RNA: ENST00000497597.5

TRAPPC12-223, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 3,401 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-223ENST00000497597 PLEK2Q9NYT0 353 aa9.26□□□□□ -0.93
TRAPPC12-223ENST00000497597 SLC17A4Q9Y2C5 497 aa9.26□□□□□ -0.93
TRAPPC12-223ENST00000497597 TRAPPC1Q9Y5R8 145 aa9.26□□□□□ -0.93
TRAPPC12-223ENST00000497597 IFNA1P01562 189 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SLC6A8P48029 635 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 DAP3P51398 398 aaKnown RBP9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 QRFPP83859 136 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 TMEM187Q14656 261 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 TDRG1Q3Y452 100 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SPANXN5Q5MJ07 72 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZNF776Q68DI1 518 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 OR2T10Q8NGZ9 312 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 RNF133Q8WVZ7 376 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 CAPNS2Q96L46 248 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 LIME1Q9H400 295 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 KLRF1Q9NZS2 232 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 COPS7AQ9UBW8 275 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SELENOKQ9Y6D0 94 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 MAP1LC3B2A6NCE7 125 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 BCL2P10415 239 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 TGFBR3Q03167 851 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 PIGYQ3MUY2 71 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SPIN2AQ99865 258 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SPIN2BQ9BPZ2 258 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 MAP1LC3BQ9GZQ8 125 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 SERINC1Q9NRX5 453 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 THAP10Q9P2Z0 257 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 ERRFI1Q9UJM3 462 aaPredicted RBP9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 A0A1B0GU03 582 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 CRYAAP02489 173 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 LCATP04180 440 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 APODP05090 189 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 DEFA4P12838 97 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZNF43P17038 809 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 HIST1H3AP68431 136 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 LILRA6Q6PI73 481 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 WDFY1Q8IWB7 410 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 MCEMP1Q8IX19 187 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 BEND2Q8NDZ0 799 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 LYPD6BQ8NI32 183 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZNF519Q8TB69 540 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 YPEL4Q96NS1 127 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 TUBD1Q9UJT1 453 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 NOTCH4Q99466 2003 aa9.25□□□□□ -0.93
TRAPPC12-223ENST00000497597 AHCTF1Q8WYP5 2266 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 A0A087WWC5 75 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SERPINE3A8MV23 424 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZNF737O75373 536 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SERPINA7P05543 415 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 CCNOP22674 350 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZNF506Q5JVG8 444 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 H1FNTQ75WM6 255 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 TCF23Q7RTU1 214 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 DEFB119Q8N690 84 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 ARL6IP6Q8N6S5 226 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 CDCA3Q99618 268 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 HSPB9Q9BQS6 159 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 TMEM204Q9BSN7 226 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 POLR3KQ9Y2Y1 108 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 NUP210LQ5VU65 1888 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 IGKV1-9A0A0C4DH69 117 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 MT-ATP6P00846 226 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 CHRNB4P30926 498 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 RAB7AP51149 207 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SUCLG1P53597 346 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 HNRNPKP61978 463 aaKnown RBP eCLIP9.24□□□□□ -0.935e-7■■■■□ 26.5
TRAPPC12-223ENST00000497597 VHLLQ6RSH7 139 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 ATOH7Q8N100 152 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 BORCS8Q96FH0 119 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SRD5A3Q9H8P0 318 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 ZDHHC11Q9H8X9 412 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 LPAR2Q9HBW0 351 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 P4HTMQ9NXG6 502 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 DOCK7Q96N67 2140 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 C3orf85A0A1B0GTC6 90 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 UBE2L5PA0A1B0GUS4 154 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 LOC102723971A0A1B0GUV8 181 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 TNFRSF10CO14798 259 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SERPINE2P07093 398 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 GZMHP20718 246 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 CNN1P51911 297 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 SYT13Q7L8C5 426 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 RNASE8Q8TDE3 154 aaKnown RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 CIB3Q96Q77 187 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 IMMP2LQ96T52 175 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 RNF208Q9H0X6 261 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 PPP1R14DQ9NXH3 145 aa9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 TIMM8BQ9Y5J9 83 aaPredicted RBP9.24□□□□□ -0.93
TRAPPC12-223ENST00000497597 IL33O95760 270 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 ISG15P05161 165 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 OR10J1P30954 320 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 HINT1P49773 126 aaPredicted RBP9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 MMDQ15546 238 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 OR2J1Q9GZK6 312 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 RYDENQ9NUL5 291 aaKnown RBP9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 VSTM2BA6NLU5 285 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 PMCHP20382 165 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 NTF3P20783 257 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 DOK3Q7L591 496 aa9.23□□□□□ -0.93
TRAPPC12-223ENST00000497597 GRINAQ7Z429 371 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms