RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 AK3Q9UIJ7 227 aa15.19■□□□□ 0.02
RGP1-202ENST00000496906 PCDHB10Q9UN67 800 aa15.19■□□□□ 0.02
RGP1-202ENST00000496906 RABL2BQ9UNT1 228 aa15.19■□□□□ 0.02
RGP1-202ENST00000496906 DVL1O14640 695 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 SLC25A16P16260 332 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 ZNF79Q15937 498 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 PNLIPRP3Q17RR3 467 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 HACD4Q5VWC8 232 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 ZNF841Q6ZN19 808 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 NLRC3Q7RTR2 1065 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 FGFRL1Q8N441 504 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 OR8B3Q8NGG8 313 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 OR5D13Q8NGL4 314 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 CLDND2Q8NHS1 167 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 GCDHQ92947 438 aaPredicted RBP15.18■□□□□ 0.02
RGP1-202ENST00000496906 OR8B2Q96RD0 313 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 FOXC2Q99958 501 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 ETAA1Q9NY74 926 aa15.18■□□□□ 0.02
RGP1-202ENST00000496906 IGHV4-61A0A0C4DH41 118 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 MGST3O14880 152 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 NDUFB3O43676 98 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 CA11O75493 328 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 IGHV2-5P01817 119 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 PTBP1P26599 531 aaKnown RBP eCLIP15.17■□□□□ 0.02
RGP1-202ENST00000496906 PAX5Q02548 391 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 LRRC10Q5BKY1 277 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 RSBN1Q5VWQ0 802 aaPredicted RBP15.17■□□□□ 0.02
RGP1-202ENST00000496906 C15orf40Q8WUR7 153 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 COQ2Q96H96 371 aa15.17■□□□□ 0.02
RGP1-202ENST00000496906 INHBBP09529 407 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 SEC61A1P61619 476 aaKnown RBP15.16■□□□□ 0.02
RGP1-202ENST00000496906 LMO4P61968 165 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 PITPNAQ00169 270 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 ZNF45Q02386 682 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 AESQ08117 197 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 GAPTQ8N292 157 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 NUDCD2Q8WVJ2 157 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 S100ZQ8WXG8 99 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 CMSS1Q9BQ75 279 aaKnown RBP15.16■□□□□ 0.02
RGP1-202ENST00000496906 HDHD3Q9BSH5 251 aaPredicted RBP15.16■□□□□ 0.02
RGP1-202ENST00000496906 CCDC168Q8NDH2 2452 aa15.16■□□□□ 0.02
RGP1-202ENST00000496906 CYSRT1A8MQ03 144 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 CTDSPLO15194 276 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 GNG2P59768 71 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 ARFRP1Q13795 201 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 EDDM3AQ14507 147 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 KRBOX4Q5JUW0 171 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 ZNF497Q6ZNH5 498 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 GDPD3Q7L5L3 318 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 ING3Q9NXR8 418 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 PRRC2AP48634 2157 aaKnown RBP15.15■□□□□ 0.02
RGP1-202ENST00000496906 A0A096LNT2 108 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 MEIOCA2RUB1 952 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 SSX5O60225 188 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 NAPSAO96009 420 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 CD3GP09693 182 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 NDUFB7P17568 137 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 ERP29P30040 261 aaKnown RBP15.15■□□□□ 0.02
RGP1-202ENST00000496906 PRSS3P35030 304 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 NPY4RP50391 375 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 P2RX3P56373 397 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 MRPS10P82664 201 aaKnown RBP15.15■□□□□ 0.02
RGP1-202ENST00000496906 GUCA2AQ02747 115 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 WDR25Q64LD2 544 aaPredicted RBP15.15■□□□□ 0.02
RGP1-202ENST00000496906 SLC35E4Q6ICL7 350 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 TPRX1Q8N7U7 411 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 Q96MF0 132 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 SRRQ9GZT4 340 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 C12orf4Q9NQ89 552 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 CLN8Q9UBY8 286 aa15.15■□□□□ 0.02
RGP1-202ENST00000496906 TMEM30CPA0ZSE6 113 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 GLIPR1P48060 266 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 EDDM3BP56851 147 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 Q6ZPA2 131 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 MRPL30Q8TCC3 161 aaKnown RBP15.14■□□□□ 0.01
RGP1-202ENST00000496906 GPX8Q8TED1 209 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 RAB39BQ96DA2 213 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 TSC22D3Q99576 134 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 SSBP3Q9BWW4 388 aaPredicted RBP15.14■□□□□ 0.01
RGP1-202ENST00000496906 SCPEP1Q9HB40 452 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 KIF25Q9UIL4 384 aa15.14■□□□□ 0.01
RGP1-202ENST00000496906 MALRD1Q5VYJ5 2156 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 TRBV6-6A0A0A6YYG2 114 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 SULT1C2O00338 296 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 GPR37O15354 613 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 MT-ND4P03905 459 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 LPLP06858 475 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 USF1P22415 310 aaPredicted RBP15.13■□□□□ 0.01
RGP1-202ENST00000496906 IL2RGP31785 369 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 GNB2P62879 340 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 MRPS15P82914 257 aaKnown RBP15.13■□□□□ 0.01
RGP1-202ENST00000496906 ESCO2Q56NI9 601 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 PYDC2Q56P42 97 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 OR52I2Q8NH67 350 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 SMIM4Q8WVI0 70 aa15.13■□□□□ 0.01
RGP1-202ENST00000496906 WDR12Q9GZL7 423 aaKnown RBP15.13■□□□□ 0.01
RGP1-202ENST00000496906 RIMS4Q9H426 269 aaPredicted RBP15.13■□□□□ 0.01
RGP1-202ENST00000496906 ODAMA1E959 279 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 FUOMA2VDF0 154 aa15.12■□□□□ 0.01
RGP1-202ENST00000496906 GABARAPH6UMI1 98 aa15.12■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms