RNA–Protein interactions for RNA: ENST00000496826.1

USF3-204, Transcript of upstream transcription factor family member 3, humanhuman

TSL 1 (best)

Gene USF3, Length 8,397 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-204ENST00000496826 IL17BQ9UHF5 180 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 DAPP1Q9UN19 280 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 HIGD1AQ9Y241 93 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RNF114Q9Y508 228 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 V9GYY9 64 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SAMD9Q5K651 1589 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 TMEM238C9JI98 176 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 NDUFA2O43678 99 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CEACAM4O75871 244 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RPL8P62917 257 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 SMAD4Q13485 552 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 SLC25A35Q3KQZ1 300 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 ZNF506Q5JVG8 444 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 TNFRSF14Q92956 283 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 DLX4Q92988 240 aaPredicted RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 HSPB9Q9BQS6 159 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 HS3ST2Q9Y278 367 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PSMB11A5LHX3 300 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 GFYI3L273 518 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SAP18O00422 153 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 GZMHP20718 246 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 NCMAPQ5T1S8 102 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 LGALS14Q8TCE9 139 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C7orf77A4D0Y5 90 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 M0R1B8 84 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PEX11BO96011 259 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CST3P01034 146 aaPredicted RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 CBLN1P23435 193 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 GDF5P43026 501 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 MRPS21P82921 87 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 ZNF146Q15072 292 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 ST3GAL2Q16842 350 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 C22orf39Q6P5X5 142 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 BAP18Q8IXM2 172 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 DOCK7Q96N67 2140 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CSF3RQ99062 836 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 WNT5BQ9H1J7 359 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RNF39Q9H2S5 420 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RBFOX1Q9NWB1 397 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 PLAGL1Q9UM63 463 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 LAMC1P11047 1609 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 ITGB1BP1O14713 200 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 CA11O75493 328 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 FGF18O76093 207 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 VENTXO95231 258 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 AMY1AP04745 511 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 GYPCP04921 128 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 ARL14EPLP0DKL9 152 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 HTN1P15515 57 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 TBXA2RP21731 343 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 RACK1P63244 317 aaKnown RBP5.2□□□□□ -1.58
USF3-204ENST00000496826 TMEM52BQ4KMG9 183 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 DNM1P46Q6ZS02 220 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 NECAP1Q8NC96 275 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 OR1P1Q8NH06 330 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 OR52E5Q8NH55 327 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SPSB1Q96BD6 273 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 SLC17A9Q9BYT1 436 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 PDZD7Q9H5P4 517 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 DUOX1Q9NRD9 1551 aa5.2□□□□□ -1.58
USF3-204ENST00000496826 A1L4Q6 167 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 HPRT1P00492 218 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 EGR3Q06889 387 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ZNF56Q15929 161 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 DEFB134Q4QY38 66 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 THAP3Q8WTV1 239 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 QTRT1Q9BXR0 403 aaKnown RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 SRD5A3Q9H8P0 318 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 PLSCR4Q9NRQ2 329 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TAS2R4Q9NYW5 299 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 NTNG1Q9Y2I2 539 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ARID1AO14497 2285 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 A0A1W2PQU0 124 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ATXN7O15265 892 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 TNFSF14O43557 240 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GABRG2P18507 467 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 IL11P20809 199 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 IER3P46695 156 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 SELENBP1Q13228 472 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TCEAL1Q15170 157 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 TBR1Q16650 682 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ASTLQ6HA08 431 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 SFTA2Q6UW10 78 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 C6orf15Q6UXA7 325 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 PIANPQ8IYJ0 282 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ZNF418Q8TF45 676 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 NKD2Q969F2 451 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 SIGMAR1Q99720 223 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ARAP3Q8WWN8 1544 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 LMO1P25800 156 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 GNG3P63215 75 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ANKRD37Q7Z713 158 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 FAM222BQ8WU58 562 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ISCA1Q9BUE6 129 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 MSL2Q9HCI7 577 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 ZBTB32Q9Y2Y4 487 aaPredicted RBP5.19□□□□□ -1.58
USF3-204ENST00000496826 SHROOM2Q13796 1616 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 NEXMIFQ5QGS0 1516 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 KIF21AQ7Z4S6 1674 aa5.19□□□□□ -1.58
USF3-204ENST00000496826 SOCS6O14544 535 aa5.19□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms