RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 CACNA1GO43497 2377 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 LCTP09848 1927 aa1.36□□□□□ -2.19
CD46-218ENST00000496723 MYO9BQ13459 2157 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 COL5A3P25940 1745 aaPredicted RBP1.35□□□□□ -2.19
CD46-218ENST00000496723 TRAV8-3A0A0A6YYJ7 113 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 LOC100506127A0A0U1RQW1 187 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 A8MWP4 228 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 GGTLC3B5MD39 225 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 M0QXV9 152 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 FFAR1O14842 300 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 SLC31A1O15431 190 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 IGKV1D-33P01593 117 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 IGKV1-33P01594 117 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 M6PRP20645 277 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 CNTFRP26992 372 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 LGALS7P47929 136 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 ETV1P50549 477 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 HBG1P69891 147 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 HBG2P69892 147 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 Q3ZCU0 254 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 FBXO48Q5FWF7 155 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 AADACL4Q5VUY2 407 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 SPNS3Q6ZMD2 512 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 LYZL2Q7Z4W2 148 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 ACBD4Q8NC06 268 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 OR2M3Q8NG83 312 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 TMEM239Q8WW34 195 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 CCDC124Q96CT7 223 aaKnown RBP1.35□□□□□ -2.19
CD46-218ENST00000496723 SLC25A44Q96H78 314 aaPredicted RBP1.35□□□□□ -2.19
CD46-218ENST00000496723 BIRC8Q96P09 236 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 LINC01587Q99440 93 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 ZNF436Q9C0F3 470 aaPredicted RBP1.35□□□□□ -2.19
CD46-218ENST00000496723 POMKQ9H5K3 350 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 CLEC2DQ9UHP7 191 aa1.35□□□□□ -2.19
CD46-218ENST00000496723 COL11A1P12107 1806 aaPredicted RBP1.35□□□□□ -2.19
CD46-218ENST00000496723 ATRNO75882 1429 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 ATAD5Q96QE3 1844 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 IGHV2-26A0A0B4J1V2 119 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 A0A1B0GXF2 115 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 A0A1W2PRG6 482 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 RNASEK-C17orf49H0YIS7 233 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 H3BP45 60 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 PLPP3O14495 311 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 CRXO43186 299 aaPredicted RBP1.34□□□□□ -2.19
CD46-218ENST00000496723 POP7O75817 140 aaKnown RBP1.34□□□□□ -2.19
CD46-218ENST00000496723 GPR75O95800 540 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 CST4P01036 141 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 PDYNP01213 254 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 IGKV5-2P06315 115 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 CCL2P13500 99 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 GTF2H1P32780 548 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 UBE2KP61086 200 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 BAXQ07812 192 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 TPBGQ13641 420 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 TRAM1Q15629 374 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 BCL2A1Q16548 175 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 CEACAM21Q3KPI0 293 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 LAMTOR1Q6IAA8 161 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 TCF24Q7RTU0 167 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 LRRC6Q86X45 466 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 OR5P3Q8WZ94 311 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 CATSPER2Q96P56 530 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 TRIB3Q96RU7 358 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 HIGD2AQ9BW72 106 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 SUCNR1Q9BXA5 334 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 BCL2L14Q9BZR8 327 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 NXT1Q9UKK6 140 aaKnown RBP1.34□□□□□ -2.19
CD46-218ENST00000496723 FADS3Q9Y5Q0 445 aa1.34□□□□□ -2.19
CD46-218ENST00000496723 ARAP3Q8WWN8 1544 aa1.34□□□□□ -2.2
CD46-218ENST00000496723 SYNRGQ9UMZ2 1314 aa1.34□□□□□ -2.2
CD46-218ENST00000496723 CEP170Q5SW79 1584 aa1.34□□□□□ -2.2
CD46-218ENST00000496723 POLR3AO14802 1390 aaPredicted RBP1.34□□□□□ -2.2
CD46-218ENST00000496723 CHD2O14647 1828 aaKnown RBP1.33□□□□□ -2.2
CD46-218ENST00000496723 IGHV1-45A0A0A0MS14 117 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 TRAV8-2A0A0B4J237 113 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 FAM183AA6NL82 134 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 ZNF879B4DU55 563 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 FABP7O15540 132 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 PDCD6O75340 191 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 CDS2O95674 445 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 LDOC1O95751 146 aaPredicted RBP1.33□□□□□ -2.2
CD46-218ENST00000496723 CA2P00918 260 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 GYPCP04921 128 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 CBR1P16152 277 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 S100A2P29034 98 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 PYCR1P32322 319 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 MAGEA3P43357 314 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 RHOAP61586 193 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 CD164Q04900 197 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 STX3Q13277 289 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 CASP8Q14790 479 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 PSG3Q16557 428 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 BSXQ3C1V8 233 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 CYHR1Q6ZMK1 362 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 Q6ZT83 130 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 FAM183BPQ6ZVS7 135 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 OLIG3Q7RTU3 272 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 MRPL52Q86TS9 123 aaKnown RBP1.33□□□□□ -2.2
CD46-218ENST00000496723 CDRT4Q8N9R6 151 aa1.33□□□□□ -2.2
CD46-218ENST00000496723 FER1L6-AS1Q8NA97 138 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms