RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 TRDCB7Z8K6 153 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 PROB1E7EW31 1015 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 DNPH1O43598 174 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 EPHA1P21709 976 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 GDF1P27539 372 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 CEBPGP53567 150 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 RUNX1Q01196 453 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 SRYQ05066 204 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 TRIM61Q5EBN2 209 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF695Q8IW36 515 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ODF3L1Q8IXM7 274 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 OR2G3Q8NGZ4 309 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 GLRX2Q9NS18 164 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ZFHX4Q86UP3 3567 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 DIDO1Q9BTC0 2240 aaKnown RBP11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF503-AS2A6NEH8 195 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 HSD17B6O14756 317 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ATXN7O15265 892 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-217ENST00000495688 HLA-HP01893 362 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF14P17017 642 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-217ENST00000495688 RAB5AP20339 215 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 FABP9Q0Z7S8 132 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 PPP1R32Q7Z5V6 425 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 DPPA2Q7Z7J5 298 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 COMMD1Q8N668 190 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 OR5C1Q8NGR4 320 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 LILRB1Q8NHL6 650 aaPredicted RBP11.18□□□□□ -0.62
PTPN7-217ENST00000495688 KCNE4Q8WWG9 221 aa11.18□□□□□ -0.62
PTPN7-217ENST00000495688 RPL36A-HNRNPH2H7BZ11 118 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 NTN3O00634 580 aaPredicted RBP11.17□□□□□ -0.62
PTPN7-217ENST00000495688 FBP1P09467 338 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 ZFP36L1Q07352 338 aaKnown RBP11.17□□□□□ -0.62
PTPN7-217ENST00000495688 SPINK14Q6IE38 97 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 SELENOHQ8IZQ5 122 aaKnown RBP11.17□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM252Q8N6L7 170 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 C1QTNF5Q9BXJ0 243 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 PRRG4Q9BZD6 226 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 STRAPQ9Y3F4 350 aaKnown RBP11.17□□□□□ -0.62
PTPN7-217ENST00000495688 NCOR1O75376 2440 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 IGKV1-6A0A0C4DH72 117 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 PRSS44E7EML9 344 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 RAB5CP51148 216 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 PCBD1P61457 104 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 RNF212Q495C1 297 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 RIPPLY2Q5TAB7 128 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF561Q8N587 486 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 CCL28Q9NRJ3 127 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 MTCH1Q9NZJ7 389 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF391Q9UJN7 358 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 PCSK5Q92824 1860 aa11.17□□□□□ -0.62
PTPN7-217ENST00000495688 ESPL1Q14674 2120 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 C5orf49A4QMS7 147 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 SLC22A20A6NK97 555 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 UBE2CO00762 179 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 CDS2O95674 445 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 CELA3AP09093 270 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF806P0C7X5 589 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 NQO2P16083 231 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ARF1P84077 181 aaKnown RBP11.16□□□□□ -0.62
PTPN7-217ENST00000495688 PRDX4Q13162 271 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 IGFBP7Q16270 282 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 HAGHQ16775 308 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ACER2Q5QJU3 275 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 SPSB3Q6PJ21 355 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 NEK7Q8TDX7 302 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 SPSB4Q96A44 273 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF488Q96MN9 340 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 Q9N2K0 584 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 GPR179Q6PRD1 2367 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 KNTC1P50748 2209 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 NGFP01138 241 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 TK1P04183 234 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 DYNLT3P51808 116 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 IZUMO4Q1ZYL8 232 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 SOHLH1Q5JUK2 328 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 C20orf204Q6ZNR8 217 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF565Q8N9K5 539 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 OR1J1Q8NGS3 322 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 HLA-CQ95604 372 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM56Q96MV1 263 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 SIGLEC12Q96PQ1 595 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 TAAR9Q96RI9 348 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 PBDC1Q9BVG4 233 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 PRDM6Q9NQX0 595 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 PLSCR2Q9NRY7 297 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 ATPIF1Q9UII2 106 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 TMEM56-RWDD3S4R434 201 aa11.16□□□□□ -0.62
PTPN7-217ENST00000495688 H3BP45 60 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 CYTIPO60759 359 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 NAPSAO96009 420 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 PDGFBP01127 241 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-217ENST00000495688 RPS23P62266 143 aaKnown RBP11.15□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF552Q9H707 407 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-217ENST00000495688 TUBA4BQ9H853 241 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 LYRM2Q9NU23 88 aaPredicted RBP11.15□□□□□ -0.62
PTPN7-217ENST00000495688 NOSIPQ9Y314 301 aaKnown RBP11.15□□□□□ -0.62
PTPN7-217ENST00000495688 R4GN57 208 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 ZNF727A8MUV8 499 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 SYNGR1O43759 233 aa11.15□□□□□ -0.62
PTPN7-217ENST00000495688 MRPL33O75394 65 aaKnown RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms