RNA–Protein interactions for RNA: ENST00000495528.1

VIM-207, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 962 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-207ENST00000495528 ZNF684Q5T5D7 378 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 RNLSQ5VYX0 342 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 Q75L30 129 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 GCSAMQ8N6F7 178 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 ZNF283Q8N7M2 679 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 ZFP41Q8N8Y5 198 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 KLF14Q8TD94 323 aaPredicted RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 RNF133Q8WVZ7 376 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 TMIGD2Q96BF3 282 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 PELI1Q96FA3 418 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 OR8B4Q96RC9 309 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 MYCBPQ99417 103 aaPredicted RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 ATF6BQ99941 703 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 MND1Q9BWT6 205 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 OR2J1Q9GZK6 312 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 EGLN1Q9GZT9 426 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 PATZ1Q9HBE1 687 aaKnown RBP5.27□□□□□ -1.57
VIM-207ENST00000495528 ACOT13Q9NPJ3 140 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 INPP5EQ9NRR6 644 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 ZFP57Q9NU63 452 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 TMEM106BQ9NUM4 274 aa5.27□□□□□ -1.57
VIM-207ENST00000495528 PNMA8CA0A1B0GUJ8 204 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 MDFIC2A0A1B0GVS7 189 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 TMEM269A0A1B0GVZ9 245 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 C5orf49A4QMS7 147 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 ZNF878C9JN71 531 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 H3BSH0 61 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 BMPR1BO00238 502 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 LALBAP00709 142 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 CD55P08174 381 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SMIM18P0DKX4 95 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SLC2A1P11166 492 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 OPRL1P41146 370 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 HTR5AP47898 357 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 CX3CR1P49238 355 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 GDI2P50395 445 aaKnown RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 WNT4P56705 351 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 ACTA2P62736 377 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 GRB2P62993 217 aaKnown RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 ACTG2P63267 376 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 TNFAIP6P98066 277 aaPredicted RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 ZMYND11Q15326 602 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 ODF4Q2M2E3 257 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 TMEM155Q4W5P6 130 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 XAF1Q6GPH4 301 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 C16orf87Q6PH81 154 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 DEGS2Q6QHC5 323 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 RFPL4BQ6ZWI9 263 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 LRRC28Q86X40 367 aaPredicted RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 SYS1Q8N2H4 156 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SPICQ8N5J4 248 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 KIR3DL3Q8N743 410 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 ZNF485Q8NCK3 441 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SLC24A4Q8NFF2 622 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 OR52N1Q8NH53 320 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 RORBQ92753 470 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SPTSSAQ969W0 71 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 MGLLQ99685 303 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 MRPS26Q9BYN8 205 aaKnown RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 ACOXLQ9NUZ1 547 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 EIF3KQ9UBQ5 218 aaKnown RBP5.26□□□□□ -1.57
VIM-207ENST00000495528 OR52A1Q9UKL2 312 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 SLC22A13Q9Y226 551 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 MMP24Q9Y5R2 645 aa5.26□□□□□ -1.57
VIM-207ENST00000495528 TRBV2A0A0J9YWF9 115 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 C5orf63A6NC05 138 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 OR6C6A6NF89 314 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 TRIM64CA6NLI5 447 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 A8MXK9 166 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 LOC110117498-PIK3R3F6TDL0 507 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 M0R135 149 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 TFAP2AP05549 437 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 WNT2P09544 360 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 ACSM4P0C7M7 580 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 COX5BP10606 129 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 CELP19835 753 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 PSMB9P28065 219 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 ZNF121P58317 390 aaPredicted RBP5.25□□□□□ -1.57
VIM-207ENST00000495528 KRTAP10-3P60369 221 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 PPP1CBP62140 327 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 BTG1P62324 171 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 PAX2Q02962 417 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 MFGE8Q08431 387 aaPredicted RBP5.25□□□□□ -1.57
VIM-207ENST00000495528 PSG7Q13046 419 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 UBE2UQ5VVX9 321 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 RPL22L1Q6P5R6 122 aaKnown RBP5.25□□□□□ -1.57
VIM-207ENST00000495528 Q6ZR03 302 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 FAM220AQ7Z4H9 259 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 SMIM29Q86T20 159 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 CATSPERDQ86XM0 798 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 EGFL6Q8IUX8 553 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 RDH10Q8IZV5 341 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 PRSS35Q8N3Z0 413 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 POC5Q8NA72 575 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 OR2G2Q8NGZ5 317 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 TMEM203Q969S6 136 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 ZNF799Q96GE5 643 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 C4orf45Q96LM5 186 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 COQ7Q99807 217 aa5.25□□□□□ -1.57
VIM-207ENST00000495528 PBOV1Q9GZY1 135 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms