RNA–Protein interactions for RNA: ENST00000494333.1

RIF1-211, Transcript of replication timing regulatory factor 1, humanhuman

TSL 3

Gene RIF1, Length 743 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-211ENST00000494333 OR4C45A6NMZ5 311 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 H3BUX3 64 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 MPZL2O60487 215 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ZNF737O75373 536 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 BAG2O95816 211 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 FADS2O95864 444 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 HNRNPCP07910 306 aaKnown RBP eCLIP6.55□□□□□ -1.36
RIF1-211ENST00000494333 NPSP0C0P6 89 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 DBTP11182 482 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 PRKACBP22694 351 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 COX7A1P24310 79 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 AZGP1P25311 298 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 PAX6P26367 422 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 DUSP1P28562 367 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 TGFBR2P37173 567 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 NPBWR2P48146 333 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 POU3F4P49335 361 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ELLP55199 621 aaPredicted RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 KRTAP10-3P60369 221 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ACTA2P62736 377 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ACTG2P63267 376 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ZNF91Q05481 1191 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ALKBH1Q13686 389 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 ZNF273Q14593 569 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 MIDNQ504T8 468 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 DHRS7BQ6IAN0 325 aaPredicted RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 ZNF782Q6ZMW2 699 aaPredicted RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 Q6ZSV7 163 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 UTS2BQ765I0 119 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 GDPD3Q7L5L3 318 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 FAM58AQ8N1B3 248 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 C11orf44Q8N8P7 122 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 DNAAF1Q8NEP3 725 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 OR52N4Q8NGI2 321 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 OR51A4Q8NGJ6 313 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 OR13C3Q8NGS6 347 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 OR10AC1Q8NH08 325 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 OR5R1Q8NH85 324 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 MRPL48Q96GC5 212 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 MYCBPQ99417 103 aaPredicted RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 PPA2Q9H2U2 334 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 ISG20L2Q9H9L3 353 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 RBFOX1Q9NWB1 397 aaKnown RBP6.55□□□□□ -1.36
RIF1-211ENST00000494333 FAM118AQ9NWS6 357 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 HHLA2Q9UM44 414 aa6.55□□□□□ -1.36
RIF1-211ENST00000494333 C17orf98A8MV24 154 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 TSPAN9O75954 239 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 HAND1O96004 215 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 ZNF728P0DKX0 622 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 PRKACAP17612 351 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 BCL3P20749 454 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 GABRR1P24046 479 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 BMXP51813 675 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 SNU13P55769 128 aaKnown RBP6.54□□□□□ -1.36
RIF1-211ENST00000494333 PDZK1IP1Q13113 114 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 EDDM3AQ14507 147 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 GRK1Q15835 563 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 LY6EQ16553 131 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 KLHL22Q53GT1 634 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 SLC35E4Q6ICL7 350 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 LHFPL4Q7Z7J7 247 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 Q8IYB0 196 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 OR8H2Q8N162 312 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 SYS1Q8N2H4 156 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 ZNF676Q8N7Q3 588 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 TPRX1Q8N7U7 411 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 OR13C9Q8NGT0 318 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 RFT1Q96AA3 541 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 OPALINQ96PE5 141 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 SPACA5Q96QH8 159 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 CITED1Q99966 193 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 CHST6Q9GZX3 395 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 SLC25A32Q9H2D1 315 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 C16orf95Q9H693 158 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 IL36RNQ9UBH0 155 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 GLS2Q9UI32 602 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 RPL36Q9Y3U8 105 aaKnown RBP6.54□□□□□ -1.36
RIF1-211ENST00000494333 NBEAL1Q6ZS30 2694 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 TENM1Q9UKZ4 2725 aa6.54□□□□□ -1.36
RIF1-211ENST00000494333 IGKV1-12A0A0C4DH73 117 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 TRBV2A0A0J9YWF9 115 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 hADV38S2A0JD32 116 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 E9PI62 339 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 SH2D1BO14796 132 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 CLPXO76031 633 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 IGKV1D-12P01611 117 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 ARG1P05089 322 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 GBX2P52951 348 aaPredicted RBP6.53□□□□□ -1.36
RIF1-211ENST00000494333 DLX6P56179 175 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 PROK1P58294 105 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 MEF2CQ06413 473 aaPredicted RBP6.53□□□□□ -1.36
RIF1-211ENST00000494333 RAB40BQ12829 278 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 LRRC75BQ2VPJ9 315 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 RNF144BQ7Z419 303 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 SERPINA12Q8IW75 414 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 ZNF555Q8NEP9 628 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 OR4S1Q8NGB4 309 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 OR52I1Q8NGK6 324 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 OR5D18Q8NGL1 313 aa6.53□□□□□ -1.36
RIF1-211ENST00000494333 OR5D14Q8NGL3 314 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms