RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 WDFY2Q96P53 400 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 CMSS1Q9BQ75 279 aaKnown RBP12.4□□□□□ -0.42
ACTB-213ENST00000493945 NXF2Q9GZY0 626 aaKnown RBP12.4□□□□□ -0.42
ACTB-213ENST00000493945 GAL3ST2Q9H3Q3 398 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.4□□□□□ -0.42
ACTB-213ENST00000493945 KCNIP1Q9NZI2 227 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 EXTL2Q9UBQ6 330 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 CTSZQ9UBR2 303 aa12.4□□□□□ -0.42
ACTB-213ENST00000493945 PPIAL4CA0A0B4J2A2 164 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 RAB27BO00194 218 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 SOCS1O15524 211 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 PSPNO60542 156 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 MSMBP08118 114 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 CDK2P24941 298 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 CBX5P45973 191 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 MRPS10P82664 201 aaKnown RBP12.39□□□□□ -0.43
ACTB-213ENST00000493945 TMEM249Q2WGJ8 235 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 CNPY1Q3B7I2 92 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 CYB5R2Q6BCY4 276 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 C17orf107Q6ZR85 190 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 FAM185AQ8N0U4 392 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 OR4S1Q8NGB4 309 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 ARHGAP5-AS1Q96IT6 56 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 DCTN5Q9BTE1 182 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 PECRQ9BY49 303 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 TRAPPC2LQ9UL33 140 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 LINC00312Q9Y6C7 94 aa12.39□□□□□ -0.43
ACTB-213ENST00000493945 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 MEIKINA0A087WXM9 373 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 A0A0G2JMP0 313 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 A0A0X1KG70 313 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 TMEM82A0PJX8 343 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 ODAMA1E959 279 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 PDCD1Q15116 288 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 TMEM30BQ3MIR4 351 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 METAP1DQ6UB28 335 aaPredicted RBP12.38□□□□□ -0.43
ACTB-213ENST00000493945 BTN2A1Q7KYR7 527 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 C6orf201Q7Z4U5 140 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 ZNF554Q86TJ5 538 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 BPIFB2Q8N4F0 458 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 OR4M2Q8NGB6 313 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 METRNQ9UJH8 293 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 RPUSD1Q9UJJ7 312 aaKnown RBP12.38□□□□□ -0.43
ACTB-213ENST00000493945 POLR3KQ9Y2Y1 108 aaPredicted RBP12.38□□□□□ -0.43
ACTB-213ENST00000493945 UBE2J1Q9Y385 318 aaPredicted RBP12.38□□□□□ -0.43
ACTB-213ENST00000493945 MYO9AB2RTY4 2548 aa12.38□□□□□ -0.43
ACTB-213ENST00000493945 MALRD1Q5VYJ5 2156 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 PDZD2O15018 2839 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 A0A0A6YYD4 124 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 UBE2QL1A1L167 161 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 MFNGO00587 321 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 PHF1O43189 567 aaPredicted RBP12.37□□□□□ -0.43
ACTB-213ENST00000493945 EIF4EP06730 217 aaKnown RBP12.37□□□□□ -0.43
ACTB-213ENST00000493945 PPIAL4GP0DN37 164 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 ELK1P19419 428 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 AMY2BP19961 511 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 GLP1RP43220 463 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 TAS2R20P59543 309 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 LCN2P80188 198 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 IL18Q14116 193 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 CDNFQ49AH0 187 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 HACD4Q5VWC8 232 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 SIGIRRQ6IA17 410 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 CNIH2Q6PI25 160 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 ZNF841Q6ZN19 808 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 ZNF497Q6ZNH5 498 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 LAX1Q8IWV1 398 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 KIR3DL3Q8N743 410 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 C8orf46Q8TAG6 207 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 C1orf159Q96HA4 380 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 C18orf12Q96KH6 178 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 COX4I2Q96KJ9 171 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 FAAP24Q9BTP7 215 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 SHARPINQ9H0F6 387 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 SCPEP1Q9HB40 452 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 TAS2R3Q9NYW6 316 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 OPN4Q9UHM6 478 aa12.37□□□□□ -0.43
ACTB-213ENST00000493945 A0A096LNT2 108 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 IGHV2-70DA0A0C4DH43 119 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 KIR2DS1A0A191URI9 304 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 ZNF729A6NN14 1252 aaPredicted RBP12.36□□□□□ -0.43
ACTB-213ENST00000493945 FOXI3A8MTJ6 420 aaPredicted RBP12.36□□□□□ -0.43
ACTB-213ENST00000493945 J3QLI3 93 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 SULT1C2O00338 296 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 CTDSP2O14595 271 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 SMAD7O15105 426 aaKnown RBP12.36□□□□□ -0.43
ACTB-213ENST00000493945 SPINT2O43291 252 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 SELLP14151 372 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 FOSL1P15407 271 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 GNB3P16520 340 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 GZMHP20718 246 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 DTYMKP23919 212 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 PTBP1P26599 531 aaKnown RBP eCLIP12.36□□□□□ -0.43
ACTB-213ENST00000493945 RBMXP38159 391 aaKnown RBP12.36□□□□□ -0.43
ACTB-213ENST00000493945 KIR2DS4P43632 304 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 DVL1P1P54792 670 aaPredicted RBP12.36□□□□□ -0.43
ACTB-213ENST00000493945 AESQ08117 197 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 KIR2DS1Q14954 304 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 METTL11BQ5VVY1 283 aa12.36□□□□□ -0.43
ACTB-213ENST00000493945 DCAF12L2Q5VW00 463 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms