RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 HSPB6O14558 160 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 MPZL2O60487 215 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 ZFPL1O95159 310 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 FADS2O95864 444 aaKnown RBP13.25□□□□□ -0.29
PTPRU-208ENST00000493601 FAM106CPP0CH98 169 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 IGLL1P15814 213 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 C17orf58Q2M2W7 97 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 PAN3Q58A45 887 aaKnown RBP13.25□□□□□ -0.29
PTPRU-208ENST00000493601 KHDC1LQ5JSQ8 128 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 ZNF691Q5VV52 312 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 FOXB2Q5VYV0 432 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 ELP2Q6IA86 826 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 LHFPL3Q86UP9 236 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 ZNF565Q8N9K5 539 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 OR9G1Q8NH87 305 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 MYDGFQ969H8 173 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 TOMM40LQ969M1 308 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 RPEQ96AT9 228 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 KIRREL1Q96J84 757 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 Q96MT0 163 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 ISG20L2Q9H9L3 353 aaKnown RBP13.25□□□□□ -0.29
PTPRU-208ENST00000493601 MOB4Q9Y3A3 225 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 HSPE1-MOB4S4R3N1 261 aa13.25□□□□□ -0.29
PTPRU-208ENST00000493601 H3BNX3 289 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 MAGEB3O15480 346 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 CLIC3O95833 236 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 AMY1AP04745 511 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 AMY2AP04746 511 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 LPCAT4Q643R3 524 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 CBR4Q8N4T8 237 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 PXT1Q8NFP0 134 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 HAVCR2Q8TDQ0 301 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 PDCD1LG2Q9BQ51 273 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 NCOR1P1Q9H4R4 102 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 ERVK13-1Q9NX77 482 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 CALYQ9NYX4 217 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 AASSQ9UDR5 926 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 ZNF281Q9Y2X9 895 aa13.24□□□□□ -0.29
PTPRU-208ENST00000493601 MEIKINA0A087WXM9 373 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 DUS4LO95620 317 aaKnown RBP13.23□□□□□ -0.29
PTPRU-208ENST00000493601 GABRB1P18505 474 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 RAB3AP20336 220 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 C21orf33P30042 268 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-208ENST00000493601 KCNJ3P48549 501 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 GBX2P52951 348 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-208ENST00000493601 RAB40BQ12829 278 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 IL13RA2Q14627 380 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 C9orf152Q5JTZ5 239 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 OSR2Q8N2R0 312 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 CNIH3Q8TBE1 160 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 RCC1LQ96I51 464 aaKnown RBP13.23□□□□□ -0.29
PTPRU-208ENST00000493601 NR1H4Q96RI1 486 aaPredicted RBP13.23□□□□□ -0.29
PTPRU-208ENST00000493601 GPER1Q99527 375 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 BARHL1Q9BZE3 327 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 FAM192AQ9GZU8 254 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 KIF25Q9UIL4 384 aa13.23□□□□□ -0.29
PTPRU-208ENST00000493601 TRAV24A0A0B4J272 114 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 J3QR06 171 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 IL1AP01583 271 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 PAX5Q02548 391 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 MADCAM1Q13477 382 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 RSU1Q15404 277 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 ZSCAN26Q16670 478 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 THNSL2Q86YJ6 484 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 OR13A1Q8NGR1 328 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 OR56B4Q8NH76 319 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 TNFAIP8L1Q8WVP5 186 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 LINC00574Q9H8X3 128 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 IDI2-AS1Q9NZ38 188 aa13.22□□□□□ -0.29
PTPRU-208ENST00000493601 DNAH3Q8TD57 4116 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 SH2D7A6NKC9 451 aaPredicted RBP13.21□□□□□ -0.29
PTPRU-208ENST00000493601 E9PI62 339 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 GABRPO00591 440 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 CGB3P0DN86 165 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 CGB7P0DN87 165 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 RAB7AP51149 207 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 UTF1Q5T230 341 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 ZNF529Q6P280 563 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 C10orf99Q6UWK7 81 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 SATL1Q86VE3 508 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 RHOXF1Q8NHV9 184 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 ZNF649Q9BS31 505 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 C9orf16Q9BUW7 83 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 AMBNQ9NP70 447 aa13.21□□□□□ -0.29
PTPRU-208ENST00000493601 RPL36Q9Y3U8 105 aaKnown RBP13.21□□□□□ -0.29
PTPRU-208ENST00000493601 A0A1W2PPI3 338 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 PSMB11A5LHX3 300 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A18PA6NE21 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A16PA6NEW6 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A20PA6NIJ5 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A9PA6NNJ1 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A12PA8MX19 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A5PA8MXJ8 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 MPIG6BO95866 241 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 CD2P06729 351 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 SNRNP70P08621 437 aaKnown RBP13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A15PP0C7V4 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A13PP0C7W8 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A14PP0C7W9 464 aa13.2□□□□□ -0.3
PTPRU-208ENST00000493601 FAM90A24PP0C7X0 464 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms