RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 DSCAML1Q8TD84 2053 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 KIAA2026Q5HYC2 2103 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 AKAP9Q99996 3911 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 B4DSR2 109 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 CTDSP2O14595 271 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 CD99P14209 185 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 GLIPR1P48060 266 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 TMEM50BP56557 158 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 RPL31P62899 125 aaKnown RBP13.04□□□□□ -0.32
HPS4-216ENST00000493455 PLAC9Q5JTB6 97 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 OLFML2AQ68BL7 652 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 CYB5R2Q6BCY4 276 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 LAX1Q8IWV1 398 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 FAM89BQ8N5H3 189 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 SETD6Q8TBK2 473 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 CCDC107Q8WV48 283 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 S100A16Q96FQ6 103 aaKnown RBP13.04□□□□□ -0.32
HPS4-216ENST00000493455 COQ2Q96H96 371 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 NUDT16L1Q9BRJ7 211 aaKnown RBP13.04□□□□□ -0.32
HPS4-216ENST00000493455 DCTN5Q9BTE1 182 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 SLIRPQ9GZT3 109 aaKnown RBP13.04□□□□□ -0.32
HPS4-216ENST00000493455 IFT22Q9H7X7 185 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 SEBOXQ9HB31 216 aaPredicted RBP13.04□□□□□ -0.32
HPS4-216ENST00000493455 DIABLOQ9NR28 239 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 ONECUT1Q9UBC0 465 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 KIF25Q9UIL4 384 aa13.04□□□□□ -0.32
HPS4-216ENST00000493455 TRAV18A0A075B6X5 111 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 MEIKINA0A087WXM9 373 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 PPIAL4CA0A0B4J2A2 164 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 A8MXK9 166 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 H3BUI4 141 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 RAB27BO00194 218 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 INHBBP09529 407 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 PPIAL4GP0DN37 164 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 ELK1P19419 428 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 CDK2P24941 298 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 GLP1RP43220 463 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 P2RX3P56373 397 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 MRPS15P82914 257 aaKnown RBP13.03□□□□□ -0.32
HPS4-216ENST00000493455 CNPY1Q3B7I2 92 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 CD276Q5ZPR3 534 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 SPNS3Q6ZMD2 512 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 GLCCI1Q86VQ1 547 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 OR4K15Q8NH41 348 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 MMP26Q9NRE1 261 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 AK3Q9UIJ7 227 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 RPUSD1Q9UJJ7 312 aaKnown RBP13.03□□□□□ -0.32
HPS4-216ENST00000493455 FLNAP21333 2647 aaKnown RBP13.03□□□□□ -0.32
HPS4-216ENST00000493455 TEX15Q9BXT5 2789 aa13.03□□□□□ -0.32
HPS4-216ENST00000493455 VPS13CQ709C8 3753 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 IGHV2-70DA0A0C4DH43 119 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 TMEM30CPA0ZSE6 113 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 FUOMA2VDF0 154 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 FOXI3A8MTJ6 420 aaPredicted RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 ENSAO43768 121 aaKnown RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 SCGNO76038 276 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 HIST1H1DP16402 221 aaKnown RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 ARFRP1Q13795 201 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 ZNF273Q14593 569 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 CDNFQ49AH0 187 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 TMEM69Q5SWH9 247 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 DCAF12L2Q5VW00 463 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 RSBN1Q5VWQ0 802 aaPredicted RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 BTNL3Q6UXE8 466 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 RAB40AQ8WXH6 277 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 TMEM186Q96B77 213 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 SMR3AQ99954 134 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 HDHD3Q9BSH5 251 aaPredicted RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 ABCG5Q9H222 651 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 HIF1ANQ9NWT6 349 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 EXTL2Q9UBQ6 330 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 ADAM30Q9UKF2 790 aa13.02□□□□□ -0.33
HPS4-216ENST00000493455 ELF5Q9UKW6 265 aaPredicted RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 MRPS7Q9Y2R9 242 aaKnown RBP13.02□□□□□ -0.33
HPS4-216ENST00000493455 WNK2Q9Y3S1 2297 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 CREBBPQ92793 2442 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 ODAMA1E959 279 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 TMEM235A6NFC5 223 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 GPR37O15354 613 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 ECDO95905 644 aaPredicted RBP13.01□□□□□ -0.33
HPS4-216ENST00000493455 APOA1P02647 267 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 CSN2P05814 226 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 CD3GP09693 182 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 PTHLHP12272 177 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 CCL3L1P16619 93 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 KCNJ3P48549 501 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 DYNC1I2Q13409 638 aaKnown RBP13.01□□□□□ -0.33
HPS4-216ENST00000493455 FAHD2BQ6P2I3 314 aaPredicted RBP13.01□□□□□ -0.33
HPS4-216ENST00000493455 UBALD1Q8TB05 177 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 MRGPRDQ8TDS7 321 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 FAHD2AQ96GK7 314 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 POM121Q96HA1 1249 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 CMSS1Q9BQ75 279 aaKnown RBP13.01□□□□□ -0.33
HPS4-216ENST00000493455 MIXL1Q9H2W2 232 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 TRAPPC2LQ9UL33 140 aa13.01□□□□□ -0.33
HPS4-216ENST00000493455 OTOGQ6ZRI0 2925 aa13□□□□□ -0.33
HPS4-216ENST00000493455 TRGV10A0A0A0MS01 117 aa13□□□□□ -0.33
HPS4-216ENST00000493455 TRBV23-1A0A0A0MS06 115 aa13□□□□□ -0.33
HPS4-216ENST00000493455 hADV38S2A0JD32 116 aa13□□□□□ -0.33
HPS4-216ENST00000493455 MFNGO00587 321 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms