RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, human

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-217	ENST00000492883	UNKL	Q9H9P5	680 aa	Known RBP	11.45	□□□□□ -0.58
CCM2-217	ENST00000492883	OR6C3	Q9NZP0	311 aa		11.45	□□□□□ -0.58
CCM2-217	ENST00000492883	UBE2J1	Q9Y385	318 aa	Predicted RBP	11.45	□□□□□ -0.58
CCM2-217	ENST00000492883	SOX21	Q9Y651	276 aa	Predicted RBP	11.45	□□□□□ -0.58
CCM2-217	ENST00000492883	ZAN	Q9Y493	2812 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883		A0A0A6YYJ9	748 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	SHISA3	A0PJX4	238 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A10P	A6NDY2	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A18P	A6NE21	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A16P	A6NEW6	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A20P	A6NIJ5	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A8P	A6NJQ4	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A7P	A6NKC0	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A22P	A8MWA6	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A12P	A8MX19	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A5P	A8MXJ8	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A23P	A8MXZ1	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	RNASEK-C17orf49	H0YIS7	233 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A15P	P0C7V4	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A13P	P0C7W8	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A14P	P0C7W9	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM90A24P	P0C7X0	464 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	JUNB	P17275	347 aa	Predicted RBP	11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	DLX6	P56179	175 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	CLDN12	P56749	244 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	RBM39	Q14498	530 aa	Known RBP	11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	C2orf76	Q3KRA6	126 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	TIMM50	Q3ZCQ8	353 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	RAB12	Q6IQ22	244 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	ZNF782	Q6ZMW2	699 aa	Predicted RBP	11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	C9orf139	Q6ZV77	190 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	TCF23	Q7RTU1	214 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	SIGLECL1	Q8N7X8	197 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	ZNF565	Q8N9K5	539 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	OR51D1	Q8NGF3	324 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	CORO2A	Q92828	525 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	ZDHHC16	Q969W1	377 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883		Q96M66	194 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	KCTD7	Q96MP8	289 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	JMJD8	Q96S16	334 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	URM1	Q9BTM9	101 aa	Known RBP	11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	TMEM59	Q9BXS4	323 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	KCNK15	Q9H427	330 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	STEAP1	Q9UHE8	339 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	KIF25	Q9UIL4	384 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	PEX16	Q9Y5Y5	336 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	ARHGAP32	A7KAX9	2087 aa		11.44	□□□□□ -0.58
CCM2-217	ENST00000492883	SMIM30	A4D0T7	59 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	TRIM64C	A6NLI5	447 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	IFITM5	A6NNB3	132 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	TMEM14DP	A8MWL7	114 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	RBP4	P02753	201 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	FUT3	P21217	361 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	COX7A1	P24310	79 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	UBE2E1	P51965	193 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	RPS27A	P62979	156 aa	Known RBP	11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	USP43	Q70EL4	1123 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	OR2W3	Q7Z3T1	314 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	TPRA1	Q86W33	373 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	PLPPR1	Q8TBJ4	325 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM3D	Q96BQ1	224 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	NEDD4L	Q96PU5	975 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	GAL3ST2	Q9H3Q3	398 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	TAS2R3	Q9NYW6	316 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	FAM96B	Q9Y3D0	163 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	PRPF8	Q6P2Q9	2335 aa	Known RBP eCLIP	11.43	□□□□□ -0.58	2e-7	■■■□□ 15.8
CCM2-217	ENST00000492883	MTOR	P42345	2549 aa		11.43	□□□□□ -0.58
CCM2-217	ENST00000492883	TMEM30CP	A0ZSE6	113 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	NPFF	O15130	113 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	PDCD6	O75340	191 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	IGHV1-8	P0DP01	117 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	GLP1R	P43220	463 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	QRFP	P83859	136 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	SRSF2	Q01130	221 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	UNC119	Q13432	240 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	DEFB112	Q30KQ8	113 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	NKAPL	Q5M9Q1	402 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	SLC35E4	Q6ICL7	350 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	GDPGP1	Q6ZNW5	385 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	PNKD	Q8N490	385 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	PIP4P2	Q8N4L2	257 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	OR13D1	Q8NGV5	346 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	YIPF6	Q96EC8	236 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	ZNF48	Q96MX3	618 aa	Predicted RBP	11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	CENPO	Q9BU64	300 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	NCOR1P1	Q9H4R4	102 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	RNF167	Q9H6Y7	350 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	ETAA1	Q9NY74	926 aa		11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	RCC2	Q9P258	522 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	ANK3	Q12955	4377 aa	Known RBP	11.42	□□□□□ -0.58
CCM2-217	ENST00000492883	TLN2	Q9Y4G6	2542 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	MDFIC2	A0A1B0GVS7	189 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	UBE2QL1	A1L167	161 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	MEIOC	A2RUB1	952 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	ZNF729	A6NN14	1252 aa	Predicted RBP	11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	NOTO	A8MTQ0	251 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	AIP	O00170	330 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	AIRE	O43918	545 aa		11.41	□□□□□ -0.58
CCM2-217	ENST00000492883	CLPX	O76031	633 aa		11.41	□□□□□ -0.58

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