RNA–Protein interactions for RNA: ENST00000492280.5

HMGN1-220, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 5

Gene HMGN1, Length 2,707 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-220ENST00000492280 RTL6Q6ICC9 239 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 FBXW12Q6X9E4 464 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 ETV3LQ6ZN32 361 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 Q6ZRG5 221 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 ARL11Q969Q4 196 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 USB1Q9BQ65 265 aaKnown RBP10.65□□□□□ -0.7
HMGN1-220ENST00000492280 DECR2Q9NUI1 292 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 KCNIP3Q9Y2W7 256 aa10.65□□□□□ -0.7
HMGN1-220ENST00000492280 MUC6Q6W4X9 2439 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 C9JQL5 133 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TRAPPC2LH3BP13 241 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 OR8U9P0C7N5 309 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CLINT1Q14677 625 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 LIAT1Q6ZQX7 453 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TBC1D26Q86UD7 250 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CXorf67Q86X51 503 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 MDS2Q8NDY4 140 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CCDC54Q8NEL0 328 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 OR8U1Q8NH10 309 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 APOBEC3DQ96AK3 386 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM9BQ9NQ34 198 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CCL28Q9NRJ3 127 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TOR1AO14656 332 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 ATG12O94817 140 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 NFYBP25208 207 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 AKR1C3P42330 323 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 NPBWR1P48145 328 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CEBPDP49716 269 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 SLC10A1Q14973 349 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 ALKBH2Q6NS38 261 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM100Q9NV29 134 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 IL36GQ9NZH8 169 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 ATP6V1G2-DDX39BF2Z307 99 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 RPL36A-HNRNPH2H7BZ11 118 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 WT1P19544 449 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CCL11P51671 97 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 POLR2GP62487 172 aaKnown RBP eCLIP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 PLP2Q04941 152 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 CEACAM21Q3KPI0 293 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF766Q5HY98 468 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 FAM53AQ6NSI3 398 aaPredicted RBP10.64□□□□□ -0.71
HMGN1-220ENST00000492280 LINC00470Q9BZP3 86 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 DNTTIP1Q9H147 329 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 RHOFQ9HBH0 211 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF391Q9UJN7 358 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 TUBD1Q9UJT1 453 aa10.64□□□□□ -0.71
HMGN1-220ENST00000492280 SLC22A20A6NK97 555 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF44P15621 663 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 CD80P33681 288 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 APLNRP35414 380 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 FGF12P61328 243 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF616Q08AN1 781 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 P4HA3Q7Z4N8 544 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 SUMF2Q8NBJ7 301 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 OR51H1Q8NH63 302 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 FZR1Q9UM11 496 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 TRGV5A0A0B4J1U4 118 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 C3orf85A0A1B0GTC6 90 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 FAM24AA6NFZ4 105 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 SIRPB1O00241 398 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 EPHA1P21709 976 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 NAAAQ02083 359 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 TRIP6Q15654 476 aaKnown RBP10.63□□□□□ -0.71
HMGN1-220ENST00000492280 DEFB124Q8NES8 71 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 WDYHV1Q96HA8 205 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 OR2J1Q9GZK6 312 aa10.63□□□□□ -0.71
HMGN1-220ENST00000492280 KLF13Q9Y2Y9 288 aaPredicted RBP10.63□□□□□ -0.71
HMGN1-220ENST00000492280 APC2O95996 2303 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 H3BP45 60 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 SSSCA1O60232 199 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 CAV2P51636 162 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 SOX8P57073 446 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 CXorf66Q5JRM2 361 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-220ENST00000492280 WDR86Q86TI4 376 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 GALNT14Q96FL9 552 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 KIRREL1Q96J84 757 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 C18orf12Q96KH6 178 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 Q9N2K0 584 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 OR1A1Q9P1Q5 309 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 DNAJB11Q9UBS4 358 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 UBE2J1Q9Y385 318 aaPredicted RBP10.62□□□□□ -0.71
HMGN1-220ENST00000492280 ZNF318Q5VUA4 2279 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 CHD3Q12873 2000 aaKnown RBP10.62□□□□□ -0.71
HMGN1-220ENST00000492280 TRAV24A0A0B4J272 114 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 KLRC4-KLRK1H3BQV0 150 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 MPPED1O15442 326 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 TPD52L2O43399 206 aaKnown RBP10.62□□□□□ -0.71
HMGN1-220ENST00000492280 ADAM20O43506 726 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 AGFG2O95081 481 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 STK11Q15831 433 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 TMEM211Q6ICI0 200 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 MKXQ8IYA7 352 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 CNEP1R1Q8N9A8 125 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 DMBX1Q8NFW5 382 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 OR1K1Q8NGR3 316 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 LOXL4Q96JB6 756 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 HIST1H2AAQ96QV6 131 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 UQCC1Q9NVA1 299 aa10.62□□□□□ -0.71
HMGN1-220ENST00000492280 H0YL77 283 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms