RNA–Protein interactions for RNA: ENST00000491128.5

SMPD4-219, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 1 (best)

Gene SMPD4, Length 2,570 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-219ENST00000491128 CSMD2Q7Z408 3487 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 C7orf66A4D0T2 115 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 ANKRD34BA5PLL1 514 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 SIX6O95475 246 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 OR5H8P0DN80 308 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 PPP3CBP16298 524 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 AESQ08117 197 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 GLDNQ6ZMI3 551 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-219ENST00000491128 SLC36A1Q7Z2H8 476 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 MUC20Q8N307 709 aaPredicted RBP11.71□□□□□ -0.53
SMPD4-219ENST00000491128 ASCC1Q8N9N2 400 aaKnown RBP11.71□□□□□ -0.53
SMPD4-219ENST00000491128 SPERTQ8NA61 448 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 PRRT1Q99946 306 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 TLNRD1Q9H1K6 362 aa11.71□□□□□ -0.53
SMPD4-219ENST00000491128 A0A1B0GUH1 482 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 ARL6IP1Q15041 203 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 CD177Q8N6Q3 437 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 TERB2Q8NHR7 220 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 MRPL30Q8TCC3 161 aaKnown RBP11.71□□□□□ -0.54
SMPD4-219ENST00000491128 ITLN2Q8WWU7 325 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-219ENST00000491128 IL1F10Q8WWZ1 152 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF486Q96H40 463 aaPredicted RBP11.71□□□□□ -0.54
SMPD4-219ENST00000491128 HES4Q9HCC6 221 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 DNAJB11Q9UBS4 358 aa11.71□□□□□ -0.54
SMPD4-219ENST00000491128 A0A1B0GWJ7 208 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 SH2D1BO14796 132 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 KNG1P01042 644 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 OR4E1P0C645 316 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 CD200P41217 278 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 COL10A1Q03692 680 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF146Q15072 292 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 CDK10Q15131 360 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 ZNRF1Q8ND25 227 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 CASTOR1Q8WTX7 329 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 DEFB108AA8MXU0 73 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 RGS13O14921 159 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 NAPSAO96009 420 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 RNF224P0DH78 156 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 VAMP1P23763 118 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 FCGR2CP31995 323 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 TAS2R46P59540 309 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 HERPUD1Q15011 391 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 VAX1Q5SQQ9 334 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 Q8IYB0 196 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF107Q9UII5 783 aaPredicted RBP11.7□□□□□ -0.54
SMPD4-219ENST00000491128 PPP1R3CQ9UQK1 317 aa11.7□□□□□ -0.54
SMPD4-219ENST00000491128 CHD6Q8TD26 2715 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 IGKV1D-17A0A075B6S4 117 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 C17orf100A8MU93 164 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 M0R233 179 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 PSG2P11465 335 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 DTYMKP23919 212 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 PPP1R1AQ13522 171 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 EDDM3AQ14507 147 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 IL13RA2Q14627 380 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 MST1LQ2TV78 715 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 C4orf17Q53FE4 359 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FGFRL1Q8N441 504 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 C5orf66Q9H5L9 145 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 ZNF286AQ9HBT8 521 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 Q9N2K0 584 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 RNF115Q9Y4L5 304 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 IGKV1-6A0A0C4DH72 117 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A10PA6NDY2 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A18PA6NE21 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A16PA6NEW6 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A20PA6NIJ5 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A8PA6NJQ4 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A7PA6NKC0 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A22PA8MWA6 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A12PA8MX19 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A5PA8MXJ8 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A23PA8MXZ1 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 LYNX1G3V0Z9 82 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 CA11O75493 328 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 LY6HO94772 140 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A15PP0C7V4 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A13PP0C7W8 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A14PP0C7W9 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 FAM90A24PP0C7X0 464 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 LYNX1P0DP58 116 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 CCL17Q92583 94 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 SLC25A21Q9BQT8 299 aaPredicted RBP11.69□□□□□ -0.54
SMPD4-219ENST00000491128 DYNLRB1Q9NP97 96 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 SLC2A8Q9NY64 477 aa11.69□□□□□ -0.54
SMPD4-219ENST00000491128 ARID1AO14497 2285 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 SRRM5B3KS81 715 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 NOS1APO75052 506 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-219ENST00000491128 HLA-AP01891 365 aaKnown RBP11.68□□□□□ -0.54
SMPD4-219ENST00000491128 PGAM2P15259 253 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 GALNT11Q8NCW6 608 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 DEDD2Q8WXF8 326 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 KIRREL1Q96J84 757 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 VRK1Q99986 396 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-219ENST00000491128 SLC23A1Q9UHI7 598 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 TRAPPC2LQ9UL33 140 aa11.68□□□□□ -0.54
SMPD4-219ENST00000491128 MAP1AP78559 2803 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-219ENST00000491128 USF3Q68DE3 2245 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms