RNA–Protein interactions for RNA: ENST00000490969.5

SNAPC3-206, Transcript of small nuclear RNA activating complex polypeptide 3, humanhuman

TSL 1 (best)

Gene SNAPC3, Length 2,524 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC3-206ENST00000490969 FAM221AA4D161 298 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 TRDCB7Z8K6 153 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 UCP3P55916 312 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 H3F3AP84243 136 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 CDH20Q9HBT6 801 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 FER1L5A0AVI2 2057 aa16.74■□□□□ 0.27
SNAPC3-206ENST00000490969 C3orf85A0A1B0GTC6 90 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 MTCP1P56278 107 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 VAMP2P63027 116 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 C5orf24Q7Z6I8 188 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 ODF3L1Q8IXM7 274 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM123Q8N131 208 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM217Q8N7C4 229 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 PILRBQ9UKJ0 227 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 WASF3Q9UPY6 502 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF814B7Z6K7 855 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 AMBPP02760 352 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 CEACAM1P13688 526 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 MDKP21741 143 aaPredicted RBP16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 RNF4P78317 190 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 BRICD5Q6PL45 260 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF100Q8IYN0 542 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 CABLES2Q9BTV7 478 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 MRPL37Q9BZE1 423 aaKnown RBP16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 GPR173Q9NS66 373 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 GNG13Q9P2W3 67 aa16.73■□□□□ 0.27
SNAPC3-206ENST00000490969 H3BMH7 237 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 SPRY1O43609 319 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 FBLP22087 321 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 HERV-K104P61576 105 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 NUTF2P61970 127 aaKnown RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 SRPXP78539 464 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 HIST3H3Q16695 136 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 CXorf66Q5JRM2 361 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 TCEAL6Q6IPX3 200 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 DPPA3Q6W0C5 159 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 ADPRHL1Q8NDY3 354 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 OR4X1Q8NH49 305 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 ACTR3CQ9C0K3 210 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 A0A1W2PNR3 127 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 MPPED1O15442 326 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 AADACP22760 399 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 HOXA6P31267 233 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 RSPO4Q2I0M5 234 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM105Q8N8V8 129 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 BEND2Q8NDZ0 799 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 THAP3Q8WTV1 239 aaPredicted RBP16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 SPIN2AQ99865 258 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 SPIN2BQ9BPZ2 258 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM222Q9H0R3 208 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF286AQ9HBT8 521 aa16.72■□□□□ 0.27
SNAPC3-206ENST00000490969 IGHV3-20A0A0C4DH32 117 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 LAMTOR5O43504 91 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 OPN1MWP04001 364 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 OPN1MW2P0DN77 364 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 OPN1MW3P0DN78 364 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF41P51814 821 aaPredicted RBP16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 LPAL2Q16609 132 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 ZNF880Q6PDB4 577 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 POM121Q96HA1 1249 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM68Q96MH6 324 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 TRAV1-1A0A0B4J248 108 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 LY6G6EA0A0G2JKS1 128 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 TMEM50AO95807 157 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 PNLIPP16233 465 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 ZFP36L1Q07352 338 aaKnown RBP16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 WDR5BQ86VZ2 330 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 C1orf210Q8IVY1 113 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 U3KQA8 63 aa16.71■□□□□ 0.27
SNAPC3-206ENST00000490969 EXPH5Q8NEV8 1989 aa16.71■□□□□ 0.26
SNAPC3-206ENST00000490969 ETV2O00321 342 aaPredicted RBP16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 BAXQ07812 192 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 HLA-BQ31612 363 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 Q6ZSR3 168 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 OR10A7Q8NGE5 316 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 POC1BQ8TC44 478 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 C10orf35Q96D05 121 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 MRGPRX4Q96LA9 322 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 DDA1Q9BW61 102 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 CCDC163A0A0D9SF12 145 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 CYTIPO60759 359 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 GLB1P16278 677 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 TAS2R30P59541 319 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 ZNF154Q13106 437 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 GUSBP11Q6P575 273 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 ZNF695Q8IW36 515 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 C17orf78Q8N4C9 275 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 OXGR1Q96P68 337 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 SDF2L1Q9HCN8 221 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 DCAF16Q9NXF7 216 aa16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 CISD1Q9NZ45 108 aaKnown RBP16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 UBE2J1Q9Y385 318 aaPredicted RBP16.7■□□□□ 0.26
SNAPC3-206ENST00000490969 ADAM20O43506 726 aa16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 EPHA8P29322 1005 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 APLNRP35414 380 aa16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 CASP6P55212 293 aa16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 FOXL2P58012 376 aa16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 RSPO1Q2MKA7 263 aaPredicted RBP16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 C1orf189Q5VU69 101 aa16.69■□□□□ 0.26
SNAPC3-206ENST00000490969 SHISA6Q6ZSJ9 500 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms