RNA–Protein interactions for RNA: ENST00000490193.5

USP39-216, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 1,028 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-216ENST00000490193 ZNF556Q9HAH1 456 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 RHOFQ9HBH0 211 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 ADGRL4Q9HBW9 690 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 EXOSC4Q9NPD3 245 aaKnown RBP6.41□□□□□ -1.38
USP39-216ENST00000490193 LIN7CQ9NUP9 197 aaKnown RBP6.41□□□□□ -1.38
USP39-216ENST00000490193 ARL8BQ9NVJ2 186 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 TVP23BQ9NYZ1 205 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 OR6C3Q9NZP0 311 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 ZNF580Q9UK33 172 aa6.41□□□□□ -1.38
USP39-216ENST00000490193 IGKV1-9A0A0C4DH69 117 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 KBTBD11-OT1A0A1B0GTJ5 212 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 LINC01548A6NM66 108 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 ZNF670-ZNF695F2Z2N8 137 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 KDM4BO94953 1096 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 IGKV1D-33P01593 117 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 IGKV1-33P01594 117 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 IGHG4P01861 327 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 HOXB6P17509 224 aaKnown RBP6.4□□□□□ -1.38
USP39-216ENST00000490193 GPR12P47775 334 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 MNAT1P51948 309 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 EFNB1P98172 346 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 MS4A2Q01362 244 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 CFHR3Q02985 330 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 ZNF816Q0VGE8 651 aaPredicted RBP6.4□□□□□ -1.38
USP39-216ENST00000490193 PDZK1IP1Q13113 114 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 GPR50Q13585 617 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 DIAPH2-AS1Q14236 149 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 HES1Q14469 280 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 ZNF260Q3ZCT1 412 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 KRBOX4Q5JUW0 171 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 AADACL4Q5VUY2 407 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 NXNL2Q5VZ03 156 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 Q6P435 159 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 SLC16A12Q6ZSM3 486 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 LHFPL2Q6ZUX7 228 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 UTS2BQ765I0 119 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 MEPCEQ7L2J0 689 aaKnown RBP6.4□□□□□ -1.38
USP39-216ENST00000490193 IZUMO1Q8IYV9 350 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 Q8N6K4 173 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 OR51T1Q8NGJ9 327 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 MYOZ3Q8TDC0 251 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 HAVCR2Q8TDQ0 301 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 DNAJC9Q8WXX5 260 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 SPSB1Q96BD6 273 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 PALMDQ9NP74 551 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 KRT84Q9NSB2 600 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 NKX1-2Q9UD57 310 aaPredicted RBP6.4□□□□□ -1.38
USP39-216ENST00000490193 GSTK1Q9Y2Q3 226 aa6.4□□□□□ -1.38
USP39-216ENST00000490193 IGKV1-12A0A0C4DH73 117 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 LOC107986453A0A1B0GWG9 222 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 NPIPB11E5RHQ5 1161 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 FAM229AH3BQW9 127 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 PRKYO43930 277 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 SULT1C4O75897 302 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 IGKV1D-12P01611 117 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 KRT8P05787 483 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 UBCP0CG48 685 aaKnown RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 CALCBP10092 127 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PRKACBP22694 351 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 NFYBP25208 207 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PSMB8P28062 276 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 POU3F4P49335 361 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 CRISP1P54107 249 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 GYS2P54840 703 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 SNU13P55769 128 aaKnown RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 MTCP1P56278 107 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 RUNX1Q01196 453 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PAX5Q02548 391 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 HNF4GQ14541 408 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 ODF4Q2M2E3 257 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 SSX6Q7RTT6 188 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 SAXO1Q8IYX7 474 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 ADGRG5Q8IZF4 528 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 HS3ST5Q8IZT8 346 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 Q8N9W7 124 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 OR10A7Q8NGE5 316 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 ASB9Q96DX5 294 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 ADAT3Q96EY9 351 aaPredicted RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 EAF1Q96JC9 268 aaPredicted RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 OSBPL10Q9BXB5 764 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PRRG3Q9BZD7 231 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PPIL3Q9H2H8 161 aaKnown RBP6.39□□□□□ -1.39
USP39-216ENST00000490193 ZMAT4Q9H898 229 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 CALYQ9NYX4 217 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 IDI2-AS1Q9NZ38 188 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 PSG11Q9UQ72 335 aa6.39□□□□□ -1.39
USP39-216ENST00000490193 IGHV1-3A0A0C4DH29 117 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 METTL15A6NJ78 407 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 GNGT2O14610 69 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 HSD17B6O14756 317 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 MPZL2O60487 215 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 RPP14O95059 124 aaKnown RBP6.38□□□□□ -1.39
USP39-216ENST00000490193 LY86O95711 162 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 IL1AP01583 271 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 MT-ND2P03891 347 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 IGF1P05019 195 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 HCKP08631 526 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 OR8U8P0C7N1 319 aa6.38□□□□□ -1.39
USP39-216ENST00000490193 FRMD6-AS1P0C7T7 363 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms