RNA–Protein interactions for RNA: ENST00000490035.6

LSAMP-205, Transcript of limbic system associated membrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSAMP, Length 9,446 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-205ENST00000490035 FAM90A24PP0C7X0 464 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CA6P23280 308 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 RAB9AP51151 201 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DLK1P80370 383 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM27D1Q5T7N8 215 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR10A7Q8NGE5 316 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 RBM38Q9H0Z9 239 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 A0A1B0GTQ1 180 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DHRS7CA6NNS2 312 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CRHP06850 196 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR5AL1P0C617 328 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 SLC37A1P57057 533 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PMP22Q01453 160 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PMS2P11Q13670 270 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PLAC9Q5JTB6 97 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PWWP2BQ6NUJ5 590 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DHRS11Q6UWP2 260 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 C1orf210Q8IVY1 113 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 H1FOOQ8IZA3 346 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF596Q8TC21 504 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 MT-ND6P03923 174 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 SULT1A1P50225 295 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 LIMK1P53667 647 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 BHLHA15Q7RTS1 189 aaPredicted RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 ALG14Q96F25 216 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR2W1Q9Y3N9 320 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 AKR7A2O43488 359 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PITX3O75364 302 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 HNF1AP20823 631 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CCR2P41597 374 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 NXPH1P58417 271 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FZD5Q13467 585 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR8B12Q8NGG6 310 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR1L3Q8NH93 324 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FBXL17Q9UF56 701 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 IGHV5-51A0A0C4DH38 117 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 FAM221AA4D161 298 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 MT-CO3P00414 261 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 CDKN2AP42771 156 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 TMEM33P57088 247 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 HTRA3P83110 453 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 RAB32Q13637 225 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PCNPQ8WW12 178 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF665Q9H7R5 613 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 KCNMB2Q9Y691 235 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DSPPQ9NZW4 1301 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 PHOX2AO14813 284 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 TCAPO15273 167 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR3A1P47881 315 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 DYNLT3P51808 116 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 COTL1Q14019 142 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 TBC1D26Q86UD7 250 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 OR2M3Q8NG83 312 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 APOBEC4Q8WW27 367 aaKnown RBP7.82□□□□□ -1.16
LSAMP-205ENST00000490035 NEU3Q9UQ49 428 aa7.82□□□□□ -1.16
LSAMP-205ENST00000490035 IGHV1OR15-9A0A0B4J2B8 117 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PPIHO43447 177 aaKnown RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 OR3A4PP47883 348 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 SELENOTP62341 195 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 VAX1Q5SQQ9 334 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF774Q6NX45 483 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 RASL11BQ9BPW5 248 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PLEKHB1Q9UF11 243 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 MIOXQ9UGB7 285 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PRSS50Q9UI38 385 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF230Q9UIE0 474 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 OR2J3O76001 311 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 GLI4P10075 376 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 MYOGP15173 224 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 GUCA2AQ02747 115 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 WIPI1Q5MNZ9 446 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 TOMM20LQ6UXN7 152 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 LINC01555Q8NAE3 123 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 BRCA1P38398 1863 aaKnown RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 LINC00862A6NCI5 91 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PPM1DO15297 605 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 TCTAP57738 103 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 HOXA4Q00056 320 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 TCTN1Q2MV58 587 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 TEPPQ6URK8 271 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 OR1L8Q8NGR8 309 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PSG11Q9UQ72 335 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 LCTP09848 1927 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PPYP01298 95 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 P01737 135 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 GAPDHP04406 335 aaKnown RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 HOXA6P31267 233 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ID1P41134 155 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ERVS71-1P61550 626 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 CALHM1Q8IU99 346 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ASB5Q8WWX0 329 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 R3HDM4Q96D70 268 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 PTBP3O95758 552 aaKnown RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 DGAT2L7PQ6IED9 249 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 MAFAQ8NHW3 353 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 RNF122Q9H9V4 155 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 SLC52A3Q9NQ40 469 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 ZNF646O15015 1829 aaPredicted RBP7.81□□□□□ -1.16
LSAMP-205ENST00000490035 CTXND1A0A1B0GTU2 59 aa7.81□□□□□ -1.16
LSAMP-205ENST00000490035 OR10J1P30954 320 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 95.9 ms