RNA–Protein interactions for RNA: ENST00000489816.5

BRD9-208, Transcript of bromodomain containing 9, humanhuman

TSL 1 (best)

Gene BRD9, Length 3,170 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD9-208ENST00000489816 TSPAN15O95858 294 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 ACP1P24666 158 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 STK11Q15831 433 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 TMEM182Q6ZP80 229 aaPredicted RBP13.48□□□□□ -0.25
BRD9-208ENST00000489816 SPAG16Q8N0X2 631 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 FAM173AQ9BQD7 235 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 C1QTNF5Q9BXJ0 243 aa13.48□□□□□ -0.25
BRD9-208ENST00000489816 MPPED1O15442 326 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 HERPUD1Q15011 391 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 ZNF565Q8N9K5 539 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 ISOC2Q96AB3 205 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 SMIM8Q96KF7 97 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 SYT3Q9BQG1 590 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 RCC2Q9P258 522 aaKnown RBP13.47□□□□□ -0.25
BRD9-208ENST00000489816 TUBD1Q9UJT1 453 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 GPR37O15354 613 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 JTBO76095 146 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 IGHEP01854 428 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 CAMLGP49069 296 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 EIF5AL1Q6IS14 154 aaKnown RBP13.47□□□□□ -0.25
BRD9-208ENST00000489816 ZNF695Q8IW36 515 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 LGI3Q8N145 548 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 MOB3AQ96BX8 217 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 REPIN1Q9BWE0 567 aaKnown RBP13.47□□□□□ -0.25
BRD9-208ENST00000489816 ARHGAP21Q5T5U3 1957 aa13.47□□□□□ -0.25
BRD9-208ENST00000489816 CDRT15L2A8MXV6 281 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 TRAPPC2LH3BP13 241 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 ST8SIA3O43173 380 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 EIF3GO75821 320 aaKnown RBP eCLIP13.46□□□□□ -0.25
BRD9-208ENST00000489816 SULT1A2P50226 295 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 USB1Q9BQ65 265 aaKnown RBP13.46□□□□□ -0.25
BRD9-208ENST00000489816 PIEZO2Q9H5I5 2752 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 E5RGE8 158 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 ADAM20O43506 726 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 TK1P04183 234 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 SNRNP70P08621 437 aaKnown RBP13.46□□□□□ -0.25
BRD9-208ENST00000489816 ZNF44P15621 663 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 ERVS71-1P61550 626 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 FAM180AQ6UWF9 173 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 ZDHHC23Q8IYP9 409 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 FAM213BQ8TBF2 198 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 KIRREL1Q96J84 757 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 HIST1H2AAQ96QV6 131 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 B4GALT7Q9UBV7 327 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 NSG2Q9Y328 171 aa13.46□□□□□ -0.25
BRD9-208ENST00000489816 ZFHX2Q9C0A1 2572 aaPredicted RBP13.46□□□□□ -0.25
BRD9-208ENST00000489816 C19orf67A6NJJ6 358 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 CD300LBA8K4G0 201 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 TNFSF15O95150 251 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 CELA3BP08861 270 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 ZNF16P17020 682 aaPredicted RBP13.46□□□□□ -0.26
BRD9-208ENST00000489816 TMEM164Q5U3C3 297 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 ASCL4Q6XD76 172 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 OR10Z1Q8NGY1 313 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 BCL2L14Q9BZR8 327 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 DECR2Q9NUI1 292 aa13.46□□□□□ -0.26
BRD9-208ENST00000489816 HEATR1Q9H583 2144 aaKnown RBP13.45□□□□□ -0.26
BRD9-208ENST00000489816 ATMQ13315 3056 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 IGKV1-6A0A0C4DH72 117 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 ATXN7O15265 892 aaPredicted RBP13.45□□□□□ -0.26
BRD9-208ENST00000489816 CA11O75493 328 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 SRSF6Q13247 344 aaKnown RBP13.45□□□□□ -0.26
BRD9-208ENST00000489816 DMBX1Q8NFW5 382 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 RGCCQ9H4X1 137 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 RPS10P5Q9NQ39 176 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 PCNX1Q96RV3 2341 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 TFF1P04155 84 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 OR13C7P0DN81 318 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 MEOX1P50221 254 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 F2RL1P55085 397 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 RNFT1Q5M7Z0 435 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 DPPA2Q7Z7J5 298 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 MKXQ8IYA7 352 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 C18orf12Q96KH6 178 aa13.45□□□□□ -0.26
BRD9-208ENST00000489816 FBXO9Q9UK97 447 aaPredicted RBP13.45□□□□□ -0.26
BRD9-208ENST00000489816 SNAPINO95295 136 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 GLAP06280 429 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PPP1CCP36873 323 aaKnown RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 KCNJ3P48549 501 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 RUNX1Q01196 453 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PLP2Q04941 152 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PEAR1Q5VY43 1037 aaPredicted RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 BTNL8Q6UX41 500 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 CXorf67Q86X51 503 aaPredicted RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 ZFP62Q8NB50 900 aaPredicted RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 IP6K3Q96PC2 410 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PQLC2LA1A4F0 135 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 M0R036 132 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 TAAR5O14804 337 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 CRYBA1P05813 215 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PLA2G5P39877 138 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 EIF5AP63241 154 aaKnown RBP13.44□□□□□ -0.26
BRD9-208ENST00000489816 GNMTQ14749 295 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 ALKBH6Q3KRA9 238 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 KRTAP27-1Q3LI81 207 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 CD300LFQ8TDQ1 290 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 RXFP4Q8TDU9 374 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 GALNT14Q96FL9 552 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 PRDM14Q9GZV8 571 aa13.44□□□□□ -0.26
BRD9-208ENST00000489816 RPL36A-HNRNPH2H7BZ11 118 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms