RNA–Protein interactions for RNA: ENST00000489403.1

CPSF3-204, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 5

Gene CPSF3, Length 688 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-204ENST00000489403 OSBPL10Q9BXB5 764 aa9.82□□□□□ -0.84
CPSF3-204ENST00000489403 ZCCHC4Q9H5U6 513 aa9.82□□□□□ -0.84
CPSF3-204ENST00000489403 OR6C3Q9NZP0 311 aa9.82□□□□□ -0.84
CPSF3-204ENST00000489403 MYRFQ9Y2G1 1151 aa9.82□□□□□ -0.84
CPSF3-204ENST00000489403 A0A1W2PPI3 338 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 OR4C45A6NMZ5 311 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 E9PQ18 207 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 H0YJX3 145 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 J3QR06 171 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 DEGS1O15121 323 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 IGHV3-7P01780 117 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 HCKP08631 526 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 RPL23AP62750 156 aaKnown RBP9.81□□□□□ -0.84
CPSF3-204ENST00000489403 BNIP1Q12981 228 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 ALKBH1Q13686 389 aaKnown RBP9.81□□□□□ -0.84
CPSF3-204ENST00000489403 DIAPH2-AS1Q14236 149 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 C8orf86Q6ZUL3 223 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 OR2W3Q7Z3T1 314 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 C5orf56Q8N8D9 126 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 OR51T1Q8NGJ9 327 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 OR13A1Q8NGR1 328 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 DPF1Q92782 380 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 LEAP2Q969E1 77 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 HRASLS5Q96KN8 279 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 C4orf36Q96KX1 117 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 NOL4LQ96MY1 436 aaPredicted RBP9.81□□□□□ -0.84
CPSF3-204ENST00000489403 GPR61Q9BZJ8 451 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 PCDHB16Q9NRJ7 776 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 CALYQ9NYX4 217 aa9.81□□□□□ -0.84
CPSF3-204ENST00000489403 AMMECR1Q9Y4X0 333 aaPredicted RBP9.81□□□□□ -0.84
CPSF3-204ENST00000489403 SAC3D1A6NKF1 404 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 J3QLW9 94 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 SULT1B1O43704 296 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 CCDC159P0C7I6 412 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 TMEM225BP0DP42 221 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 DBTP11182 482 aaKnown RBP9.8□□□□□ -0.84
CPSF3-204ENST00000489403 ZNF19P17023 458 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 TMEM11P17152 192 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 MTNR1BP49286 362 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 CD69Q07108 199 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 HES1Q14469 280 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 KISS1Q15726 138 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 LCE2DQ5TA82 110 aaPredicted RBP9.8□□□□□ -0.84
CPSF3-204ENST00000489403 C1orf146Q5VVC0 180 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 DRAM1Q8N682 238 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 CHPT1Q8WUD6 406 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 TRUB1Q8WWH5 349 aaKnown RBP9.8□□□□□ -0.84
CPSF3-204ENST00000489403 CENPNQ96H22 339 aaPredicted RBP9.8□□□□□ -0.84
CPSF3-204ENST00000489403 B9D2Q9BPU9 175 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 IMPAD1Q9NX62 359 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 IDI2-AS1Q9NZ38 188 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 KIF25Q9UIL4 384 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 LINC00527Q9UJ94 153 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 PSG11Q9UQ72 335 aa9.8□□□□□ -0.84
CPSF3-204ENST00000489403 MEIKINA0A087WXM9 373 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 TRAV24A0A0B4J272 114 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 FGF16O43320 207 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 IL1AP01583 271 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 VSIG8P0DPA2 414 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 GNG10P50151 68 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 LTC4SQ16873 150 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 PAN3Q58A45 887 aaKnown RBP9.79□□□□□ -0.84
CPSF3-204ENST00000489403 SLC25A30Q5SVS4 291 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 ZNF691Q5VV52 312 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 RSBN1Q5VWQ0 802 aaPredicted RBP9.79□□□□□ -0.84
CPSF3-204ENST00000489403 LPCAT4Q643R3 524 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 OR8H3Q8N146 312 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 PARP16Q8N5Y8 322 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 ACBD7Q8N6N7 88 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 ZNF565Q8N9K5 539 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 KLHL30-AS1Q8NEE0 82 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 CNIH3Q8TBE1 160 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 PLPPR1Q8TBJ4 325 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 MRGPRDQ8TDS7 321 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 NR1H4Q96RI1 486 aaPredicted RBP9.79□□□□□ -0.84
CPSF3-204ENST00000489403 P2RX4Q99571 388 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 NCOR1P1Q9H4R4 102 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 LINC00574Q9H8X3 128 aa9.79□□□□□ -0.84
CPSF3-204ENST00000489403 EXOGQ9Y2C4 368 aaKnown RBP9.79□□□□□ -0.84
CPSF3-204ENST00000489403 SERPINE3A8MV23 424 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 NUDT19A8MXV4 375 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 NPIPB11E5RHQ5 1161 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ZFPL1O95159 310 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 IGKV1D-33P01593 117 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 IGKV1-33P01594 117 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 IGHG2P01859 326 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 C21orf33P30042 268 aaPredicted RBP9.78□□□□□ -0.84
CPSF3-204ENST00000489403 SSTR5P35346 364 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 MYCNOSP40205 109 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 RAB7AP51149 207 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 SNRPGP62308 76 aaKnown RBP9.78□□□□□ -0.84
CPSF3-204ENST00000489403 MADCAM1Q13477 382 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 GALEQ14376 348 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 IL13RA2Q14627 380 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ZSCAN26Q16670 478 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 MEDAGQ5VYS4 303 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 ELP2Q6IA86 826 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 SLC35E3Q7Z769 313 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 LHFPL3Q86UP9 236 aa9.78□□□□□ -0.84
CPSF3-204ENST00000489403 SERPINA12Q8IW75 414 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms