RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 TBPL2Q6SJ96 375 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 PLCZ1Q86YW0 608 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 BLIDQ8IZY5 108 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 MUC15Q8N387 334 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 SLC25A45Q8N413 288 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 ZNF615Q8N8J6 731 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 ZFP62Q8NB50 900 aaPredicted RBP2.46□□□□□ -2.02
XRN1-213ENST00000489241 ULBP1Q9BZM6 244 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 COMMD9Q9P000 198 aa2.46□□□□□ -2.02
XRN1-213ENST00000489241 C14orf166Q9Y224 244 aaKnown RBP2.46□□□□□ -2.02
XRN1-213ENST00000489241 TBL2Q9Y4P3 447 aaKnown RBP2.46□□□□□ -2.02
XRN1-213ENST00000489241 IGHV3OR16-8A0A075B7F1 116 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 GMNCA6NCL1 334 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 MFNGO00587 321 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 ISLRO14498 428 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 PHYHO14832 338 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 RGS5O15539 181 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 COCHO43405 550 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 NRASP01111 189 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 HRASP01112 189 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 KRASP01116 189 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 PYCR1P32322 319 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 IDH2P48735 452 aaKnown RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 RPL14P50914 215 aaKnown RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 DYNLL1P63167 89 aaKnown RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 ZNF235Q14590 738 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 GOLGA7BQ2TAP0 167 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 TTMPQ5BVD1 217 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 FAM45BPQ6NSW5 357 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 C16orf47Q6ZP98 133 aaPredicted RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 NEGR1Q7Z3B1 354 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 DAZ4Q86SG3 579 aaKnown RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 HMGN2P46Q86SG4 172 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 MNS1Q8NEH6 495 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 OR8A1Q8NGG7 326 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 OR5L1Q8NGL2 311 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 CASTOR1Q8WTX7 329 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 DNAJB3Q8WWF6 145 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 ARL5BQ96KC2 179 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 GPR22Q99680 433 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 PRSS27Q9BQR3 290 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 DCUN1D5Q9BTE7 237 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 EBPLQ9BY08 206 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 UGT2B28Q9BY64 529 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 DAZ1Q9NQZ3 744 aaKnown RBP2.45□□□□□ -2.02
XRN1-213ENST00000489241 NAGKQ9UJ70 344 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 POMPQ9Y244 141 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 BTRCQ9Y297 605 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 SLC22A7Q9Y694 548 aa2.45□□□□□ -2.02
XRN1-213ENST00000489241 MYO15BQ96JP2 1530 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 ZNF98A6NK75 572 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 FTCDNL1E5RQL4 147 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 F5H5K5 113 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 SLC31A1O15431 190 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 CYTH3O43739 400 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 ZNF3P17036 446 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 AKR1C4P17516 323 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 ATF1P18846 271 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 PMELP40967 661 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 FAM3AP98173 230 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 KPRPQ5T749 579 aaPredicted RBP2.44□□□□□ -2.02
XRN1-213ENST00000489241 SDHAF4Q5VUM1 108 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 XKRXQ6PP77 449 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 FAM131AQ6UXB0 335 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 FAM19A3Q7Z5A8 133 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 DPPA2Q7Z7J5 298 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 OR8S1Q8NH09 359 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 C2orf15Q8WU43 125 aaKnown RBP2.44□□□□□ -2.02
XRN1-213ENST00000489241 PARVGQ9HBI0 331 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 HMGXB4Q9UGU5 601 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 SCN1AP35498 2009 aa2.44□□□□□ -2.02
XRN1-213ENST00000489241 ATRNO75882 1429 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 TUBGCP6Q96RT7 1819 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 TMEM250H0YL14 139 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 ATP8B1O43520 1251 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 RBBP9O75884 186 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 GTF2F2P13984 249 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 CNTFRP26992 372 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 CBX5P45973 191 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 ZNF83P51522 516 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 CLDN12P56749 244 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 FAM53BQ14153 422 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 MRPL2Q5T653 305 aaKnown RBP2.43□□□□□ -2.02
XRN1-213ENST00000489241 ELP2Q6IA86 826 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 DRAM2Q6UX65 266 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 FAM151BQ6UXP7 276 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 OLIG3Q7RTU3 272 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 OR4P4Q8NGL7 312 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 RBPMSQ93062 196 aaKnown RBP2.43□□□□□ -2.02
XRN1-213ENST00000489241 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 RSPO3Q9BXY4 272 aaPredicted RBP2.43□□□□□ -2.02
XRN1-213ENST00000489241 DMAC2Q9NW81 257 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 NKIRAS1Q9NYS0 192 aa2.43□□□□□ -2.02
XRN1-213ENST00000489241 PTPRKQ15262 1439 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 POLR3AO14802 1390 aaPredicted RBP2.42□□□□□ -2.02
XRN1-213ENST00000489241 IGLV2-18A0A075B6J9 118 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 A0A0A6YYH2 397 aa2.42□□□□□ -2.02
XRN1-213ENST00000489241 IGHV3-43A0A0B4J1X8 118 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms