RNA–Protein interactions for RNA: ENST00000489032.5

TRAPPC12-221, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 561 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-221ENST00000489032 PP6455Q8WZ26 134 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR5P3Q8WZ94 311 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 AP3S1Q92572 193 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 RNF183Q96D59 192 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF649Q9BS31 505 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 BPESC1Q9GZL8 116 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 NXF2Q9GZY0 626 aaKnown RBP6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 SHARPINQ9H0F6 387 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 SNTG1Q9NSN8 517 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 UFSP2Q9NUQ7 469 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 TXNL4BQ9NX01 149 aaKnown RBP6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 KIAA1456Q9P272 454 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 RNF7Q9UBF6 113 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 NPTNQ9Y639 398 aa6.7□□□□□ -1.34
TRAPPC12-221ENST00000489032 IGHV3-64DA0A0J9YX35 117 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 ANKRD61A6NGH8 418 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR4C45A6NMZ5 311 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF732B4DXR9 585 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 SRD5A1P18405 259 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 CALRP27797 417 aaKnown RBP6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 RPS25P62851 125 aaKnown RBP6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF45Q02386 682 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 MAB21L1Q13394 359 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 CDK5R1Q15078 307 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 CEACAM21Q3KPI0 293 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 PRAMEF6Q5VXH4 476 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 HIST2H2BDQ6DRA6 164 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 Q6ZSR3 168 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 KRT74Q7RTS7 529 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF573Q86YE8 665 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 RDH10Q8IZV5 341 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 MUC20Q8N307 709 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 SPICQ8N5J4 248 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR1M1Q8NGA1 313 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 GPR148Q8TDV2 347 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM170AQ8WVE7 144 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 THRSPQ92748 146 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM203Q969S6 136 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 RAB39BQ96DA2 213 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 MSI2Q96DH6 328 aaKnown RBP6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 SMIM19Q96E16 107 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 CEP19Q96LK0 163 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 GAL3ST1Q99999 423 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 C6orf62Q9GZU0 229 aaPredicted RBP6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 MAP6D1Q9H9H5 199 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 GPR173Q9NS66 373 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 C1orf123Q9NWV4 160 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 CACNG2Q9Y698 323 aa6.69□□□□□ -1.34
TRAPPC12-221ENST00000489032 PPIAL4EA0A075B759 164 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 LRP5LA4QPB2 252 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 A6NIN4 97 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 E9PI62 339 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PPIAL4DF5H284 164 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM178BH3BS89 294 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 MAGEB3O15480 346 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 OGG1O15527 345 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PLPP2O43688 288 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CDRT1O95170 752 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PTBP3O95758 552 aaKnown RBP6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CYB5AP00167 134 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CYB5R3P00387 301 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PPIAL4FP0DN26 164 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PRKACBP22694 351 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CD40LGP29965 261 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 MDH2P40926 338 aaKnown RBP6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 GPM6AP51674 278 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 FUT6P51993 359 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 BTG1P62324 171 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 FABP5Q01469 135 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 SPRNQ5BIV9 151 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 YIF1BQ5BJH7 314 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 SPANXN2Q5MJ10 180 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 AVPI1Q5T686 147 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMEM42Q69YG0 159 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 C22orf42Q6IC83 251 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 SERPINA12Q8IW75 414 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 OR5D14Q8NGL3 314 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 ZNF671Q8TAW3 534 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 SLC25A46Q96AG3 418 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 FGGYQ96C11 551 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 BORCS8Q96FH0 119 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CPNE2Q96FN4 548 aaPredicted RBP6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PDCD1LG2Q9BQ51 273 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 TMED9Q9BVK6 235 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 CHST5Q9GZS9 411 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 NARFLQ9H6Q4 476 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 POLDIP2Q9Y2S7 368 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 WIPI2Q9Y4P8 454 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 PPIAL4AQ9Y536 164 aa6.68□□□□□ -1.34
TRAPPC12-221ENST00000489032 SVEP1Q4LDE5 3571 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 TRAV38-1A0A0B4J264 116 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 IGHV4-61A0A0C4DH41 118 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 FAM230AA0A1W2PPH8 454 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 GABRPO00591 440 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 CDIPTO14735 213 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 NDUFA2O43678 99 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 ARL6IP5O75915 188 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 ATF1P18846 271 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 CPT2P23786 658 aa6.67□□□□□ -1.34
TRAPPC12-221ENST00000489032 MYL9P24844 172 aa6.67□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms