RNA–Protein interactions for RNA: ENST00000488937.1

PRPF4-203, Transcript of pre-mRNA processing factor 4, humanhuman

TSL 3

Gene PRPF4, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-203ENST00000488937 C3orf33Q6P1S2 294 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 DNAJC24Q6P3W2 148 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ALKAL1Q6UXT8 129 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 HIST2H3AQ71DI3 136 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 OLIG3Q7RTU3 272 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 TMEM144Q7Z5S9 345 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 SLC25A45Q8N413 288 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 C12orf29Q8N999 325 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ZIC4Q8N9L1 334 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 CYGBQ8WWM9 190 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 UCN3Q969E3 161 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 SMIM8Q96KF7 97 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 CEP170P1Q96L14 293 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 TMEM243Q9BU79 118 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 TIPINQ9BVW5 301 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 SLC25A2Q9BXI2 301 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 EBPLQ9BY08 206 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ZSCAN16Q9H4T2 348 aaPredicted RBP2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ZNF696Q9H7X3 374 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 PLEKHF2Q9H8W4 249 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 PARVAQ9NVD7 372 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 RBM12B-AS1Q9P1G2 102 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 OR12D3Q9UGF7 316 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
PRPF4-203ENST00000488937 PRELID3BQ9Y3B1 194 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 WSB1Q9Y6I7 421 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ITGB4P16144 1822 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 VIRMAQ69YN4 1812 aaKnown RBP2.46□□□□□ -2.02
PRPF4-203ENST00000488937 PCNX3Q9H6A9 2034 aa2.46□□□□□ -2.02
PRPF4-203ENST00000488937 ASTN1O14525 1302 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 NFASCO94856 1347 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 PIKFYVEQ9Y2I7 2098 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 A0A0J9YXY3 114 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 FAM159BA6NKW6 160 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR11H12B2RN74 326 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 TRIM49D1C9J1S8 452 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 TMEM250H0YL14 139 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 GALR3O60755 368 aaPredicted RBP2.45□□□□□ -2.02
PRPF4-203ENST00000488937 CCDC22O60826 627 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 DHRS3O75911 302 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 IGLV2-23P01705 113 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 FABP3P05413 133 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OMGP23515 440 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 RCVRNP35243 200 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR3A4PP47883 348 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 RPL23P62829 140 aaKnown RBP2.45□□□□□ -2.02
PRPF4-203ENST00000488937 CRADDP78560 199 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 PSG4Q00888 419 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 APOFQ13790 326 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 PAFAH1B3Q15102 231 aaKnown RBP2.45□□□□□ -2.02
PRPF4-203ENST00000488937 RBMY1FQ15415 496 aaKnown RBP2.45□□□□□ -2.02
PRPF4-203ENST00000488937 NSDHLQ15738 373 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 LIN52Q52LA3 116 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 ATP6AP1LQ52LC2 224 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 GLYATQ6IB77 296 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 ZNF343Q6P1L6 599 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 DOLPP1Q86YN1 238 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 DRAM1Q8N682 238 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 SLC35G3Q8N808 338 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR2M7Q8NG81 312 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR11H1Q8NG94 326 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR11H2Q8NH07 326 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 DYDC1Q8WWB3 177 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 NEURL3Q96EH8 262 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 MRPL48Q96GC5 212 aaKnown RBP2.45□□□□□ -2.02
PRPF4-203ENST00000488937 C18orf15Q96N68 181 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 OR4K3Q96R72 315 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 PHB2Q99623 299 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 SIGMAR1Q99720 223 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 MED18Q9BUE0 208 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 SPNS1Q9H2V7 528 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 TXNIPQ9H3M7 391 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 PTGES2Q9H7Z7 377 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 FAM49BQ9NUQ9 324 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 IDI2-AS1Q9NZ38 188 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 ANGPT4Q9Y264 503 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 BTRCQ9Y297 605 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 KIF24Q5T7B8 1368 aa2.45□□□□□ -2.02
PRPF4-203ENST00000488937 LOXHD1Q8IVV2 1947 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 PIK3C2GO75747 1445 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 POGZQ7Z3K3 1410 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 TRAV8-3A0A0A6YYJ7 113 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 IGHV3-74A0A0B4J1X5 117 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 LOC389332A0A1B0GUA5 103 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 WI2-2373I1.2A0A1W2PRP0 233 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 PQLC2LA1A4F0 135 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 OR6C6A6NF89 314 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 EPOPA6NHQ4 379 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 ZNF729A6NN14 1252 aaPredicted RBP2.44□□□□□ -2.02
PRPF4-203ENST00000488937 D6RAR5 112 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 MANBAO00462 879 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 GYG2O15488 501 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 TCF21O43680 179 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 TNFSF13O75888 250 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 ARL6IP5O75915 188 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 OR7C1O76099 320 aaPredicted RBP2.44□□□□□ -2.02
PRPF4-203ENST00000488937 DHFRP00374 187 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 IFNA21P01568 189 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 IGLV2-8P01709 118 aa2.44□□□□□ -2.02
PRPF4-203ENST00000488937 IGHG2P01859 326 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms