RNA–Protein interactions for RNA: ENST00000488801.5

PTCD3-217, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-217ENST00000488801 DPCDQ9BVM2 203 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-217ENST00000488801 CST11Q9H112 138 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 KCNK15Q9H427 330 aa15.25■□□□□ 0.03
PTCD3-217ENST00000488801 UBE2J1Q9Y385 318 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-217ENST00000488801 SOX21Q9Y651 276 aaPredicted RBP15.25■□□□□ 0.03
PTCD3-217ENST00000488801 ODAMA1E959 279 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 TCF21O43680 179 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 OR7C1O76099 320 aaPredicted RBP15.24■□□□□ 0.03
PTCD3-217ENST00000488801 FPR2P25090 351 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 GLIPR1P48060 266 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 GUCA2AQ02747 115 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 SCN1BQ07699 218 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 TAF9Q16594 264 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 GAPTQ8N292 157 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 BPIFB2Q8N4F0 458 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 PIP4P2Q8N4L2 257 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 ZNF714Q96N38 554 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 TM2D1Q9BX74 207 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 SUCNR1Q9BXA5 334 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 OR51E2Q9H255 320 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 BANF2Q9H503 90 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 FBLN5Q9UBX5 448 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 V9GY05 133 aa15.24■□□□□ 0.03
PTCD3-217ENST00000488801 FUOMA2VDF0 154 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 LDLRAD4O15165 306 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 CRTAPO75718 401 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-217ENST00000488801 VENTXO95231 258 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 CGB3P0DN86 165 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 CGB7P0DN87 165 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 UBE2E1P51965 193 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 RPS27AP62979 156 aaKnown RBP15.23■□□□□ 0.03
PTCD3-217ENST00000488801 PRB3Q04118 309 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-217ENST00000488801 BLMHQ13867 455 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 KRBOX4Q5JUW0 171 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 OR2W3Q7Z3T1 314 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 YIPF6Q96EC8 236 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 SELENOIQ9C0D9 397 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 MS4A7Q9GZW8 240 aaPredicted RBP15.23■□□□□ 0.03
PTCD3-217ENST00000488801 ESM1Q9NQ30 184 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 TAS2R3Q9NYW6 316 aa15.23■□□□□ 0.03
PTCD3-217ENST00000488801 MEX3AA1L020 520 aaKnown RBP15.22■□□□□ 0.03
PTCD3-217ENST00000488801 HSPB6O14558 160 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 CLPXO76031 633 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 IGHV1-8P0DP01 117 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 CD36P16671 472 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 GADD45AP24522 165 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 MYL9P24844 172 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 PSMD7P51665 324 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 OR10A3P58181 314 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 ERVFRD-1P60508 538 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 OR10K2Q6IF99 312 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 SIGLECL1Q8N7X8 197 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 ZDHHC22Q8N966 263 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 KCNG3Q8TAE7 436 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 ZNF418Q8TF45 676 aaPredicted RBP15.22■□□□□ 0.03
PTCD3-217ENST00000488801 FAM46BQ96A09 425 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 AJUBAQ96IF1 538 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 TMEM59Q9BXS4 323 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 LINC00574Q9H8X3 128 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 SPACA1Q9HBV2 294 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 KIF25Q9UIL4 384 aa15.22■□□□□ 0.03
PTCD3-217ENST00000488801 FOXI3A8MTJ6 420 aaPredicted RBP15.21■□□□□ 0.03
PTCD3-217ENST00000488801 ODF3BA8MYP8 253 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 PDCD5O14737 125 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 GLAP06280 429 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 RAB11BQ15907 218 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 SLC35E4Q6ICL7 350 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 CYYR1Q96J86 154 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 OCEL1Q9H607 264 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 PLGRKTQ9HBL7 147 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 VCX3AQ9NNX9 186 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 STEAP1Q9UHE8 339 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 SSR3Q9UNL2 185 aa15.21■□□□□ 0.03
PTCD3-217ENST00000488801 TRGV10A0A0A0MS01 117 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 A0A0A6YYD4 124 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 MDFIC2A0A1B0GVS7 189 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 hCG_1809904A0A1W2PP81 198 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 A0A1W2PPE2 198 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 A0A1W2PR64 198 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 A0A1W2PRV1 198 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 IFITM5A6NNB3 132 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 AIPO00170 330 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 NPFFO15130 113 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 MPIG6BO95866 241 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 RAB3BP20337 219 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 P2RY14Q15391 338 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 C17orf58Q2M2W7 97 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 DEFB112Q30KQ8 113 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 HEPN1Q6WQI6 88 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 LDLRAD3Q86YD5 345 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 PDZD9Q8IXQ8 264 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 FAM89BQ8N5H3 189 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 OR13A1Q8NGR1 328 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 NICN1Q9BSH3 213 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 BARHL1Q9BZE3 327 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 LPAR5Q9H1C0 372 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 OR6C3Q9NZP0 311 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 STAB1Q9NY15 2570 aa15.2■□□□□ 0.02
PTCD3-217ENST00000488801 ZNF729A6NN14 1252 aaPredicted RBP15.19■□□□□ 0.02
PTCD3-217ENST00000488801 CLDN34H7C241 214 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms