RNA–Protein interactions for RNA: ENST00000488117.5

C9orf72-205, Transcript of chromosome 9 open reading frame 72, humanhuman

TSL 2

Gene C9orf72, Length 4,808 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf72-205ENST00000488117 SSSCA1O60232 199 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SS18L1O75177 396 aaPredicted RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SCO1O75880 301 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 HBE1P02100 147 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 MBPP02686 304 aaPredicted RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 GRPP07492 148 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 IL2RGP31785 369 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 KCNJ3P48549 501 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 PRSS12P56730 875 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 RPS23P62266 143 aaKnown RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 HBG1P69891 147 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 HBG2P69892 147 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 BAXQ07812 192 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 PDCD1Q15116 288 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 DEFB109BQ30KR1 87 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 ZNF718Q3SXZ3 478 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SP6Q3SY56 376 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 Q6ZRG5 221 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 RNF144BQ7Z419 303 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 LILRB2Q8N423 598 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 PRR18Q8N4B5 295 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 ZFP62Q8NB50 900 aaPredicted RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 OR10V1Q8NGI7 309 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 RDH5Q92781 318 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 BCL2L2Q92843 193 aaPredicted RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 WDYHV1Q96HA8 205 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 AKR1E2Q96JD6 320 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM222Q9H0R3 208 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TAAR3PQ9P1P4 343 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 LPAR3Q9UBY5 353 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 IL17BQ9UHF5 180 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 ATP23Q9Y6H3 246 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 LOC400499M0QZD8 3231 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 BTBD17A6NE02 478 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 UMAD1C9J7I0 102 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 H0Y980 276 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TRIM77I1YAP6 450 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 AQP7O14520 342 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SPINT2O43291 252 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 ADAM20O43506 726 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 PITX3O75364 302 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TUSC2O75896 110 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 FTH1P19P0C7X4 201 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TNFSF4P23510 183 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM33P57088 247 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SMIM21Q3B7S5 101 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 FAM209AQ5JX71 171 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SPATA46Q5T0L3 261 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 C1QTNF12Q5T7M4 302 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 PXDC1Q5TGL8 231 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 RPL7L1Q6DKI1 246 aaKnown RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 Q6ZS49 121 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 BEND4Q6ZU67 534 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 C17orf78Q8N4C9 275 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 SLC35G3Q8N808 338 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 LRTM2Q8N967 370 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 C1orf162Q8NEQ5 155 aaPredicted RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 OR5D13Q8NGL4 314 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 FGFBP3Q8TAT2 258 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 CD300LFQ8TDQ1 290 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 GTF3AQ92664 365 aaKnown RBP2.28□□□□□ -2.04
C9orf72-205ENST00000488117 WNT2BQ93097 391 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 MUCL1Q96DR8 90 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 C18orf12Q96KH6 178 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 POM121L2Q96KW2 1035 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TAAR6Q96RI8 345 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 REG4Q9BYZ8 158 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 FN3KRPQ9HA64 309 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 C19orf12Q9NSK7 152 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 OR2W1Q9Y3N9 320 aa2.28□□□□□ -2.04
C9orf72-205ENST00000488117 TMEM218A2RU14 115 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 FGF16O43320 207 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 CRYABP02511 175 aaKnown RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 SEC11BP0C7V7 166 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 IRF2P14316 349 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 CBR1P16152 277 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 CD200P41217 278 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 SULT1A2P50226 295 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 DVL1P1P54792 670 aaPredicted RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 HGFACQ04756 655 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 RHEBQ15382 184 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 IGFBP7Q16270 282 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 RSPO1Q2MKA7 263 aaPredicted RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 ALKBH2Q6NS38 261 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 FAM122CQ6P4D5 195 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 TMEM182Q6ZP80 229 aaPredicted RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 COLCA1Q6ZS62 124 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 FAM214BQ7L5A3 538 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 BHLHA15Q7RTS1 189 aaPredicted RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 LYZL2Q7Z4W2 148 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 VASH2Q86V25 355 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 GAPTQ8N292 157 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 ZBTB34Q8NCN2 500 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 OR2G3Q8NGZ4 309 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 LILRB1Q8NHL6 650 aaPredicted RBP2.28□□□□□ -2.05
C9orf72-205ENST00000488117 FAM213BQ8TBF2 198 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 MRGPRFQ96AM1 343 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 RAB40CQ96S21 281 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 RNF126Q9BV68 326 aa2.28□□□□□ -2.05
C9orf72-205ENST00000488117 SEC11CQ9BY50 192 aa2.28□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms